Protein–RNA interactions for Protein: Q96M42

LINC00479, Putative uncharacterized protein encoded by LINC00479, humanhuman

Predictions only

Length 142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00479Q96M42 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
LINC00479Q96M42 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
LINC00479Q96M42 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC16.82■□□□□ 0.28
LINC00479Q96M42 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
LINC00479Q96M42 DUX4L9-201ENST00000449051 1259 ntBASIC16.82■□□□□ 0.28
LINC00479Q96M42 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LINC00479Q96M42 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC16.82■□□□□ 0.28
LINC00479Q96M42 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LINC00479Q96M42 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC16.82■□□□□ 0.28
LINC00479Q96M42 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LINC00479Q96M42 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC16.82■□□□□ 0.28
LINC00479Q96M42 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
LINC00479Q96M42 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LINC00479Q96M42 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
LINC00479Q96M42 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC16.81■□□□□ 0.28
LINC00479Q96M42 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LINC00479Q96M42 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC16.81■□□□□ 0.28
LINC00479Q96M42 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC16.81■□□□□ 0.28
LINC00479Q96M42 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LINC00479Q96M42 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
LINC00479Q96M42 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC16.81■□□□□ 0.28
LINC00479Q96M42 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LINC00479Q96M42 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LINC00479Q96M42 AC010542.4-201ENST00000563151 1910 ntBASIC16.81■□□□□ 0.28
LINC00479Q96M42 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LINC00479Q96M42 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LINC00479Q96M42 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
LINC00479Q96M42 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC16.81■□□□□ 0.28
LINC00479Q96M42 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC16.81■□□□□ 0.28
LINC00479Q96M42 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LINC00479Q96M42 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LINC00479Q96M42 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC16.81■□□□□ 0.28
LINC00479Q96M42 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LINC00479Q96M42 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LINC00479Q96M42 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
LINC00479Q96M42 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LINC00479Q96M42 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LINC00479Q96M42 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LINC00479Q96M42 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC16.8■□□□□ 0.28
LINC00479Q96M42 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC16.8■□□□□ 0.28
LINC00479Q96M42 GAK-223ENST00000628912 497 ntTSL 5 BASIC16.8■□□□□ 0.28
LINC00479Q96M42 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
LINC00479Q96M42 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC16.8■□□□□ 0.28
LINC00479Q96M42 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LINC00479Q96M42 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
LINC00479Q96M42 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LINC00479Q96M42 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
LINC00479Q96M42 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LINC00479Q96M42 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
LINC00479Q96M42 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
LINC00479Q96M42 USF2-207ENST00000595068 1612 ntTSL 5 BASIC16.79■□□□□ 0.28
LINC00479Q96M42 AC073130.3-201ENST00000624389 2278 ntBASIC16.79■□□□□ 0.28
LINC00479Q96M42 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LINC00479Q96M42 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
LINC00479Q96M42 LBH-205ENST00000407930 756 ntTSL 2 BASIC16.79■□□□□ 0.28
LINC00479Q96M42 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC16.79■□□□□ 0.28
LINC00479Q96M42 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC16.79■□□□□ 0.28
LINC00479Q96M42 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
LINC00479Q96M42 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
LINC00479Q96M42 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
LINC00479Q96M42 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LINC00479Q96M42 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC16.79■□□□□ 0.28
LINC00479Q96M42 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
LINC00479Q96M42 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
LINC00479Q96M42 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
LINC00479Q96M42 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LINC00479Q96M42 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC16.79■□□□□ 0.28
LINC00479Q96M42 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC16.79■□□□□ 0.28
LINC00479Q96M42 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
LINC00479Q96M42 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
LINC00479Q96M42 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LINC00479Q96M42 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
LINC00479Q96M42 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC16.78■□□□□ 0.28
LINC00479Q96M42 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LINC00479Q96M42 MIR4449-201ENST00000578365 66 ntBASIC16.78■□□□□ 0.28
LINC00479Q96M42 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
LINC00479Q96M42 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC16.78■□□□□ 0.28
LINC00479Q96M42 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC16.78■□□□□ 0.28
LINC00479Q96M42 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LINC00479Q96M42 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LINC00479Q96M42 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC16.78■□□□□ 0.28
LINC00479Q96M42 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
LINC00479Q96M42 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LINC00479Q96M42 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC16.77■□□□□ 0.28
LINC00479Q96M42 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC16.77■□□□□ 0.28
LINC00479Q96M42 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LINC00479Q96M42 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
LINC00479Q96M42 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LINC00479Q96M42 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
LINC00479Q96M42 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
LINC00479Q96M42 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
LINC00479Q96M42 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC16.77■□□□□ 0.28
LINC00479Q96M42 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC16.77■□□□□ 0.27
LINC00479Q96M42 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
LINC00479Q96M42 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
LINC00479Q96M42 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC16.77■□□□□ 0.27
LINC00479Q96M42 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC16.77■□□□□ 0.27
LINC00479Q96M42 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
LINC00479Q96M42 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LINC00479Q96M42 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms