Protein–RNA interactions for Protein: Q96H15

TIMD4, T-cell immunoglobulin and mucin domain-containing protein 4, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMD4Q96H15 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC18.53■□□□□ 0.56
TIMD4Q96H15 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TIMD4Q96H15 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC18.52■□□□□ 0.56
TIMD4Q96H15 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TIMD4Q96H15 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
TIMD4Q96H15 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TIMD4Q96H15 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TIMD4Q96H15 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
TIMD4Q96H15 NME4-202ENST00000382940 766 ntTSL 3 BASIC18.52■□□□□ 0.56
TIMD4Q96H15 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
TIMD4Q96H15 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
TIMD4Q96H15 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
TIMD4Q96H15 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC18.52■□□□□ 0.56
TIMD4Q96H15 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC18.52■□□□□ 0.56
TIMD4Q96H15 NME4-211ENST00000620944 1193 ntTSL 2 BASIC18.52■□□□□ 0.56
TIMD4Q96H15 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC18.52■□□□□ 0.56
TIMD4Q96H15 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TIMD4Q96H15 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.56
TIMD4Q96H15 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
TIMD4Q96H15 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
TIMD4Q96H15 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TIMD4Q96H15 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
TIMD4Q96H15 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
TIMD4Q96H15 AK1-201ENST00000223836 736 ntTSL 3 BASIC18.51■□□□□ 0.55
TIMD4Q96H15 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TIMD4Q96H15 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TIMD4Q96H15 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC18.51■□□□□ 0.55
TIMD4Q96H15 AC010525.1-201ENST00000585559 441 ntBASIC18.51■□□□□ 0.55
TIMD4Q96H15 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC18.51■□□□□ 0.55
TIMD4Q96H15 AC087239.1-201ENST00000622671 572 ntBASIC18.51■□□□□ 0.55
TIMD4Q96H15 AC068587.7-201ENST00000641602 218 ntBASIC18.51■□□□□ 0.55
TIMD4Q96H15 AC004687.1-201ENST00000579003 1625 ntBASIC18.51■□□□□ 0.55
TIMD4Q96H15 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TIMD4Q96H15 STX4-202ENST00000394998 1498 ntTSL 2 BASIC18.51■□□□□ 0.55
TIMD4Q96H15 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TIMD4Q96H15 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TIMD4Q96H15 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC18.51■□□□□ 0.55
TIMD4Q96H15 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TIMD4Q96H15 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TIMD4Q96H15 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
TIMD4Q96H15 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TIMD4Q96H15 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
TIMD4Q96H15 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC18.5■□□□□ 0.55
TIMD4Q96H15 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TIMD4Q96H15 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TIMD4Q96H15 MIR5787-201ENST00000611784 55 ntBASIC18.5■□□□□ 0.55
TIMD4Q96H15 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC18.5■□□□□ 0.55
TIMD4Q96H15 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TIMD4Q96H15 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TIMD4Q96H15 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
TIMD4Q96H15 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TIMD4Q96H15 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC18.5■□□□□ 0.55
TIMD4Q96H15 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC18.49■□□□□ 0.55
TIMD4Q96H15 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TIMD4Q96H15 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TIMD4Q96H15 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TIMD4Q96H15 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC18.49■□□□□ 0.55
TIMD4Q96H15 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC18.49■□□□□ 0.55
TIMD4Q96H15 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC18.49■□□□□ 0.55
TIMD4Q96H15 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TIMD4Q96H15 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TIMD4Q96H15 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC18.49■□□□□ 0.55
TIMD4Q96H15 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
TIMD4Q96H15 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TIMD4Q96H15 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
TIMD4Q96H15 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
TIMD4Q96H15 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
TIMD4Q96H15 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TIMD4Q96H15 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
TIMD4Q96H15 MIR572-201ENST00000384983 95 ntBASIC18.48■□□□□ 0.55
TIMD4Q96H15 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC18.48■□□□□ 0.55
TIMD4Q96H15 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TIMD4Q96H15 AL358852.1-201ENST00000623174 1268 ntBASIC18.48■□□□□ 0.55
TIMD4Q96H15 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TIMD4Q96H15 H19-210ENST00000439725 1929 ntTSL 2 BASIC18.48■□□□□ 0.55
TIMD4Q96H15 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC18.48■□□□□ 0.55
TIMD4Q96H15 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TIMD4Q96H15 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC18.48■□□□□ 0.55
TIMD4Q96H15 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
TIMD4Q96H15 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC18.48■□□□□ 0.55
TIMD4Q96H15 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
TIMD4Q96H15 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC18.47■□□□□ 0.55
TIMD4Q96H15 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
TIMD4Q96H15 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TIMD4Q96H15 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TIMD4Q96H15 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TIMD4Q96H15 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TIMD4Q96H15 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
TIMD4Q96H15 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC18.47■□□□□ 0.55
TIMD4Q96H15 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC18.46■□□□□ 0.55
TIMD4Q96H15 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TIMD4Q96H15 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TIMD4Q96H15 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC18.46■□□□□ 0.55
TIMD4Q96H15 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
TIMD4Q96H15 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TIMD4Q96H15 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC18.46■□□□□ 0.55
TIMD4Q96H15 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TIMD4Q96H15 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TIMD4Q96H15 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC18.46■□□□□ 0.55
TIMD4Q96H15 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC18.46■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 12.1 ms