Protein–RNA interactions for Protein: Q96BT1

C3orf49, Putative uncharacterized protein C3orf49, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf49Q96BT1 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
C3orf49Q96BT1 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
C3orf49Q96BT1 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
C3orf49Q96BT1 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC20.09■□□□□ 0.81
C3orf49Q96BT1 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
C3orf49Q96BT1 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
C3orf49Q96BT1 AC004687.1-201ENST00000579003 1625 ntBASIC20.09■□□□□ 0.81
C3orf49Q96BT1 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
C3orf49Q96BT1 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
C3orf49Q96BT1 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC20.08■□□□□ 0.81
C3orf49Q96BT1 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
C3orf49Q96BT1 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.81
C3orf49Q96BT1 AC087742.1-201ENST00000575880 1738 ntBASIC20.08■□□□□ 0.81
C3orf49Q96BT1 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.81
C3orf49Q96BT1 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.81
C3orf49Q96BT1 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
C3orf49Q96BT1 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.81
C3orf49Q96BT1 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC20.08■□□□□ 0.81
C3orf49Q96BT1 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC20.08■□□□□ 0.81
C3orf49Q96BT1 AC241377.3-202ENST00000626088 1088 ntBASIC20.08■□□□□ 0.81
C3orf49Q96BT1 AC241585.3-202ENST00000628937 1088 ntBASIC20.08■□□□□ 0.81
C3orf49Q96BT1 AC245100.8-202ENST00000629247 1058 ntBASIC20.08■□□□□ 0.81
C3orf49Q96BT1 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
C3orf49Q96BT1 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
C3orf49Q96BT1 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
C3orf49Q96BT1 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
C3orf49Q96BT1 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
C3orf49Q96BT1 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
C3orf49Q96BT1 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
C3orf49Q96BT1 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
C3orf49Q96BT1 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC20.07■□□□□ 0.8
C3orf49Q96BT1 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
C3orf49Q96BT1 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC20.07■□□□□ 0.8
C3orf49Q96BT1 AL499627.2-201ENST00000606283 725 ntBASIC20.07■□□□□ 0.8
C3orf49Q96BT1 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC20.07■□□□□ 0.8
C3orf49Q96BT1 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
C3orf49Q96BT1 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
C3orf49Q96BT1 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
C3orf49Q96BT1 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
C3orf49Q96BT1 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
C3orf49Q96BT1 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
C3orf49Q96BT1 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC20.06■□□□□ 0.8
C3orf49Q96BT1 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
C3orf49Q96BT1 QDPR-206ENST00000508623 601 ntTSL 3 BASIC20.06■□□□□ 0.8
C3orf49Q96BT1 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
C3orf49Q96BT1 AL512631.2-201ENST00000604634 923 ntBASIC20.06■□□□□ 0.8
C3orf49Q96BT1 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC20.06■□□□□ 0.8
C3orf49Q96BT1 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
C3orf49Q96BT1 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC20.06■□□□□ 0.8
C3orf49Q96BT1 GATM-206ENST00000558336 1522 ntTSL 2 BASIC20.06■□□□□ 0.8
C3orf49Q96BT1 GTSE1-AS1-202ENST00000623117 1518 ntBASIC20.06■□□□□ 0.8
C3orf49Q96BT1 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
C3orf49Q96BT1 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
C3orf49Q96BT1 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
C3orf49Q96BT1 EP400NL-214ENST00000641289 2402 ntBASIC20.05■□□□□ 0.8
C3orf49Q96BT1 ECEL1P1-201ENST00000373592 1742 ntBASIC20.05■□□□□ 0.8
C3orf49Q96BT1 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
C3orf49Q96BT1 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
C3orf49Q96BT1 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC20.05■□□□□ 0.8
C3orf49Q96BT1 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
C3orf49Q96BT1 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC20.05■□□□□ 0.8
C3orf49Q96BT1 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC20.05■□□□□ 0.8
C3orf49Q96BT1 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
C3orf49Q96BT1 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
C3orf49Q96BT1 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
C3orf49Q96BT1 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC20.05■□□□□ 0.8
C3orf49Q96BT1 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
C3orf49Q96BT1 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
C3orf49Q96BT1 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
C3orf49Q96BT1 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
C3orf49Q96BT1 AC006455.2-201ENST00000429931 906 ntBASIC20.04■□□□□ 0.8
C3orf49Q96BT1 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC20.04■□□□□ 0.8
C3orf49Q96BT1 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC20.04■□□□□ 0.8
C3orf49Q96BT1 LINC01960-201ENST00000563759 1884 ntBASIC20.04■□□□□ 0.8
C3orf49Q96BT1 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
C3orf49Q96BT1 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
C3orf49Q96BT1 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
C3orf49Q96BT1 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
C3orf49Q96BT1 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
C3orf49Q96BT1 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
C3orf49Q96BT1 AC242852.2-201ENST00000615738 1807 ntBASIC20.04■□□□□ 0.8
C3orf49Q96BT1 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
C3orf49Q96BT1 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
C3orf49Q96BT1 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
C3orf49Q96BT1 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
C3orf49Q96BT1 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
C3orf49Q96BT1 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC20.03■□□□□ 0.8
C3orf49Q96BT1 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
C3orf49Q96BT1 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC20.03■□□□□ 0.8
C3orf49Q96BT1 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC20.03■□□□□ 0.8
C3orf49Q96BT1 SRR-208ENST00000576848 588 ntTSL 4 BASIC20.03■□□□□ 0.8
C3orf49Q96BT1 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC20.03■□□□□ 0.8
C3orf49Q96BT1 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC20.03■□□□□ 0.8
C3orf49Q96BT1 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
C3orf49Q96BT1 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
C3orf49Q96BT1 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
C3orf49Q96BT1 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
C3orf49Q96BT1 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC20.03■□□□□ 0.8
C3orf49Q96BT1 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC20.03■□□□□ 0.8
C3orf49Q96BT1 LSR-203ENST00000360798 1963 ntTSL 2 BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms