Protein–RNA interactions for Protein: Q96B67

ARRDC3, Arrestin domain-containing protein 3, humanhuman

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARRDC3Q96B67 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
ARRDC3Q96B67 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
ARRDC3Q96B67 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC22.13■■□□□ 1.13
ARRDC3Q96B67 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC22.13■■□□□ 1.13
ARRDC3Q96B67 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC22.12■■□□□ 1.13
ARRDC3Q96B67 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC22.12■■□□□ 1.13
ARRDC3Q96B67 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
ARRDC3Q96B67 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
ARRDC3Q96B67 AL358852.1-201ENST00000623174 1268 ntBASIC22.12■■□□□ 1.13
ARRDC3Q96B67 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC22.12■■□□□ 1.13
ARRDC3Q96B67 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
ARRDC3Q96B67 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC22.12■■□□□ 1.13
ARRDC3Q96B67 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC22.12■■□□□ 1.13
ARRDC3Q96B67 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
ARRDC3Q96B67 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC22.11■■□□□ 1.13
ARRDC3Q96B67 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC22.11■■□□□ 1.13
ARRDC3Q96B67 EI24-211ENST00000534546 1544 ntTSL 2 BASIC22.11■■□□□ 1.13
ARRDC3Q96B67 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC22.11■■□□□ 1.13
ARRDC3Q96B67 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
ARRDC3Q96B67 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
ARRDC3Q96B67 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC22.11■■□□□ 1.13
ARRDC3Q96B67 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
ARRDC3Q96B67 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC22.11■■□□□ 1.13
ARRDC3Q96B67 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC22.11■■□□□ 1.13
ARRDC3Q96B67 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
ARRDC3Q96B67 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC22.11■■□□□ 1.13
ARRDC3Q96B67 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC22.11■■□□□ 1.13
ARRDC3Q96B67 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC22.11■■□□□ 1.13
ARRDC3Q96B67 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC22.11■■□□□ 1.13
ARRDC3Q96B67 AL031602.1-201ENST00000633169 911 ntBASIC22.11■■□□□ 1.13
ARRDC3Q96B67 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC22.11■■□□□ 1.13
ARRDC3Q96B67 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
ARRDC3Q96B67 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
ARRDC3Q96B67 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
ARRDC3Q96B67 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
ARRDC3Q96B67 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
ARRDC3Q96B67 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC22.1■■□□□ 1.13
ARRDC3Q96B67 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC22.1■■□□□ 1.13
ARRDC3Q96B67 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC22.1■■□□□ 1.13
ARRDC3Q96B67 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
ARRDC3Q96B67 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC22.1■■□□□ 1.13
ARRDC3Q96B67 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
ARRDC3Q96B67 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC22.1■■□□□ 1.13
ARRDC3Q96B67 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC22.1■■□□□ 1.13
ARRDC3Q96B67 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC22.1■■□□□ 1.13
ARRDC3Q96B67 LHPP-203ENST00000392757 840 ntTSL 3 BASIC22.1■■□□□ 1.13
ARRDC3Q96B67 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC22.1■■□□□ 1.13
ARRDC3Q96B67 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC22.1■■□□□ 1.13
ARRDC3Q96B67 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC22.1■■□□□ 1.13
ARRDC3Q96B67 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
ARRDC3Q96B67 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
ARRDC3Q96B67 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC22.1■■□□□ 1.13
ARRDC3Q96B67 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
ARRDC3Q96B67 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC22.09■■□□□ 1.13
ARRDC3Q96B67 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
ARRDC3Q96B67 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
ARRDC3Q96B67 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
ARRDC3Q96B67 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC22.09■■□□□ 1.13
ARRDC3Q96B67 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
ARRDC3Q96B67 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC22.09■■□□□ 1.13
ARRDC3Q96B67 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC22.09■■□□□ 1.13
ARRDC3Q96B67 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC22.09■■□□□ 1.13
ARRDC3Q96B67 AC027612.3-201ENST00000413684 1047 ntBASIC22.09■■□□□ 1.13
ARRDC3Q96B67 YBX1P1-201ENST00000445822 960 ntBASIC22.09■■□□□ 1.13
ARRDC3Q96B67 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC22.09■■□□□ 1.13
ARRDC3Q96B67 AL354811.1-201ENST00000610286 706 ntBASIC22.09■■□□□ 1.13
ARRDC3Q96B67 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
ARRDC3Q96B67 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC22.09■■□□□ 1.13
ARRDC3Q96B67 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC22.09■■□□□ 1.13
ARRDC3Q96B67 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
ARRDC3Q96B67 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
ARRDC3Q96B67 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC22.08■■□□□ 1.13
ARRDC3Q96B67 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
ARRDC3Q96B67 RARA-203ENST00000394086 2008 ntTSL 2 BASIC22.08■■□□□ 1.13
ARRDC3Q96B67 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
ARRDC3Q96B67 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC22.08■■□□□ 1.13
ARRDC3Q96B67 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
ARRDC3Q96B67 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC22.08■■□□□ 1.13
ARRDC3Q96B67 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC22.08■■□□□ 1.12
ARRDC3Q96B67 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
ARRDC3Q96B67 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
ARRDC3Q96B67 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC22.07■■□□□ 1.12
ARRDC3Q96B67 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
ARRDC3Q96B67 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC22.07■■□□□ 1.12
ARRDC3Q96B67 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
ARRDC3Q96B67 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC22.07■■□□□ 1.12
ARRDC3Q96B67 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC22.07■■□□□ 1.12
ARRDC3Q96B67 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC22.07■■□□□ 1.12
ARRDC3Q96B67 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC22.07■■□□□ 1.12
ARRDC3Q96B67 AL162430.1-201ENST00000480705 870 ntBASIC22.07■■□□□ 1.12
ARRDC3Q96B67 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
ARRDC3Q96B67 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC22.07■■□□□ 1.12
ARRDC3Q96B67 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC22.07■■□□□ 1.12
ARRDC3Q96B67 AC105233.4-201ENST00000642045 216 ntBASIC22.07■■□□□ 1.12
ARRDC3Q96B67 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
ARRDC3Q96B67 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
ARRDC3Q96B67 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
ARRDC3Q96B67 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
ARRDC3Q96B67 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC22.06■■□□□ 1.12
ARRDC3Q96B67 AC104564.3-201ENST00000582367 638 ntBASIC22.06■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms