Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
DDX1Q92499 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
DDX1Q92499 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
DDX1Q92499 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
DDX1Q92499 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC23.58■■□□□ 1.36
DDX1Q92499 GUSBP5-202ENST00000510805 1989 ntBASIC23.58■■□□□ 1.36
DDX1Q92499 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC23.57■■□□□ 1.36
DDX1Q92499 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
DDX1Q92499 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC23.57■■□□□ 1.36
DDX1Q92499 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
DDX1Q92499 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC23.57■■□□□ 1.36
DDX1Q92499 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
DDX1Q92499 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
DDX1Q92499 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
DDX1Q92499 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC23.57■■□□□ 1.36
DDX1Q92499 AL512631.2-201ENST00000604634 923 ntBASIC23.57■■□□□ 1.36
DDX1Q92499 AC009086.3-201ENST00000623486 1008 ntBASIC23.57■■□□□ 1.36
DDX1Q92499 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
DDX1Q92499 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC23.57■■□□□ 1.36
DDX1Q92499 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
DDX1Q92499 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC23.56■■□□□ 1.36
DDX1Q92499 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC23.56■■□□□ 1.36
DDX1Q92499 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC23.56■■□□□ 1.36
DDX1Q92499 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC23.56■■□□□ 1.36
DDX1Q92499 GTSE1-AS1-202ENST00000623117 1518 ntBASIC23.56■■□□□ 1.36
DDX1Q92499 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC23.56■■□□□ 1.36
DDX1Q92499 PARL-206ENST00000435888 1098 ntTSL 5 BASIC23.56■■□□□ 1.36
DDX1Q92499 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC23.56■■□□□ 1.36
DDX1Q92499 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
DDX1Q92499 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
DDX1Q92499 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC23.56■■□□□ 1.36
DDX1Q92499 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC23.55■■□□□ 1.36
DDX1Q92499 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC23.55■■□□□ 1.36
DDX1Q92499 LGR4-203ENST00000480977 492 ntTSL 2 BASIC23.55■■□□□ 1.36
DDX1Q92499 AL499627.2-201ENST00000606283 725 ntBASIC23.55■■□□□ 1.36
DDX1Q92499 AC106739.1-201ENST00000617035 715 ntBASIC23.55■■□□□ 1.36
DDX1Q92499 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
DDX1Q92499 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC23.55■■□□□ 1.36
DDX1Q92499 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC23.55■■□□□ 1.36
DDX1Q92499 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
DDX1Q92499 AC127496.7-201ENST00000625110 1798 ntBASIC23.55■■□□□ 1.36
DDX1Q92499 AC079834.2-201ENST00000609776 1949 ntBASIC23.55■■□□□ 1.36
DDX1Q92499 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
DDX1Q92499 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC23.55■■□□□ 1.36
DDX1Q92499 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
DDX1Q92499 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
DDX1Q92499 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC23.54■■□□□ 1.36
DDX1Q92499 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC23.54■■□□□ 1.36
DDX1Q92499 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
DDX1Q92499 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
DDX1Q92499 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC23.53■■□□□ 1.36
DDX1Q92499 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC23.53■■□□□ 1.36
DDX1Q92499 EP400NL-214ENST00000641289 2402 ntBASIC23.53■■□□□ 1.36
DDX1Q92499 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
DDX1Q92499 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
DDX1Q92499 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
DDX1Q92499 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC23.53■■□□□ 1.36
DDX1Q92499 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC23.53■■□□□ 1.36
DDX1Q92499 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC23.53■■□□□ 1.36
DDX1Q92499 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
DDX1Q92499 MIR4466-201ENST00000606121 54 ntBASIC23.53■■□□□ 1.36
DDX1Q92499 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
DDX1Q92499 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC23.53■■□□□ 1.36
DDX1Q92499 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC23.52■■□□□ 1.36
DDX1Q92499 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
DDX1Q92499 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
DDX1Q92499 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
DDX1Q92499 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC23.52■■□□□ 1.36
DDX1Q92499 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC23.52■■□□□ 1.36
DDX1Q92499 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
DDX1Q92499 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
DDX1Q92499 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
DDX1Q92499 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC23.52■■□□□ 1.36
DDX1Q92499 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
DDX1Q92499 GATM-206ENST00000558336 1522 ntTSL 2 BASIC23.52■■□□□ 1.36
DDX1Q92499 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC23.52■■□□□ 1.36
DDX1Q92499 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC23.52■■□□□ 1.36
DDX1Q92499 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
DDX1Q92499 AC004687.1-201ENST00000579003 1625 ntBASIC23.51■■□□□ 1.35
DDX1Q92499 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC23.51■■□□□ 1.35
DDX1Q92499 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
DDX1Q92499 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
DDX1Q92499 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC23.51■■□□□ 1.35
DDX1Q92499 AC006455.2-201ENST00000429931 906 ntBASIC23.51■■□□□ 1.35
DDX1Q92499 PBX2P1-201ENST00000493219 1291 ntBASIC23.51■■□□□ 1.35
DDX1Q92499 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC23.51■■□□□ 1.35
DDX1Q92499 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC23.51■■□□□ 1.35
DDX1Q92499 AC241377.3-202ENST00000626088 1088 ntBASIC23.51■■□□□ 1.35
DDX1Q92499 AC241585.3-202ENST00000628937 1088 ntBASIC23.51■■□□□ 1.35
DDX1Q92499 AC245100.8-202ENST00000629247 1058 ntBASIC23.51■■□□□ 1.35
DDX1Q92499 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC23.51■■□□□ 1.35
DDX1Q92499 LSR-203ENST00000360798 1963 ntTSL 2 BASIC23.51■■□□□ 1.35
DDX1Q92499 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC23.51■■□□□ 1.35
DDX1Q92499 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
DDX1Q92499 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
DDX1Q92499 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
DDX1Q92499 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
DDX1Q92499 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC23.5■■□□□ 1.35
DDX1Q92499 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC23.5■■□□□ 1.35
DDX1Q92499 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms