Protein–RNA interactions for Protein: Q8WUY9

DEPDC1B, DEP domain-containing protein 1B, humanhuman

Predictions only

Length 529 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1BQ8WUY9 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
DEPDC1BQ8WUY9 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC23.29■■□□□ 1.32
DEPDC1BQ8WUY9 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
DEPDC1BQ8WUY9 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC23.29■■□□□ 1.32
DEPDC1BQ8WUY9 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
DEPDC1BQ8WUY9 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
DEPDC1BQ8WUY9 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC23.29■■□□□ 1.32
DEPDC1BQ8WUY9 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
DEPDC1BQ8WUY9 NME4-202ENST00000382940 766 ntTSL 3 BASIC23.29■■□□□ 1.32
DEPDC1BQ8WUY9 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC23.29■■□□□ 1.32
DEPDC1BQ8WUY9 NME4-211ENST00000620944 1193 ntTSL 2 BASIC23.29■■□□□ 1.32
DEPDC1BQ8WUY9 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
DEPDC1BQ8WUY9 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC23.29■■□□□ 1.32
DEPDC1BQ8WUY9 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC23.29■■□□□ 1.32
DEPDC1BQ8WUY9 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
DEPDC1BQ8WUY9 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
DEPDC1BQ8WUY9 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC23.28■■□□□ 1.32
DEPDC1BQ8WUY9 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
DEPDC1BQ8WUY9 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC23.28■■□□□ 1.32
DEPDC1BQ8WUY9 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC23.28■■□□□ 1.32
DEPDC1BQ8WUY9 AC068473.5-201ENST00000616428 2072 ntBASIC23.28■■□□□ 1.32
DEPDC1BQ8WUY9 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
DEPDC1BQ8WUY9 ASB1-202ENST00000409297 878 ntTSL 5 BASIC23.28■■□□□ 1.32
DEPDC1BQ8WUY9 SLC47A1P1-202ENST00000449666 945 ntBASIC23.28■■□□□ 1.32
DEPDC1BQ8WUY9 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
DEPDC1BQ8WUY9 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC23.28■■□□□ 1.32
DEPDC1BQ8WUY9 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC23.28■■□□□ 1.32
DEPDC1BQ8WUY9 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
DEPDC1BQ8WUY9 AL358852.1-201ENST00000623174 1268 ntBASIC23.28■■□□□ 1.32
DEPDC1BQ8WUY9 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
DEPDC1BQ8WUY9 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
DEPDC1BQ8WUY9 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
DEPDC1BQ8WUY9 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC23.28■■□□□ 1.32
DEPDC1BQ8WUY9 AC012676.1-201ENST00000574705 1949 ntBASIC23.27■■□□□ 1.32
DEPDC1BQ8WUY9 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
DEPDC1BQ8WUY9 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
DEPDC1BQ8WUY9 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
DEPDC1BQ8WUY9 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC23.27■■□□□ 1.32
DEPDC1BQ8WUY9 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC23.27■■□□□ 1.32
DEPDC1BQ8WUY9 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC23.27■■□□□ 1.32
DEPDC1BQ8WUY9 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC23.27■■□□□ 1.32
DEPDC1BQ8WUY9 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC23.27■■□□□ 1.31
DEPDC1BQ8WUY9 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
DEPDC1BQ8WUY9 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
DEPDC1BQ8WUY9 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC23.26■■□□□ 1.31
DEPDC1BQ8WUY9 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
DEPDC1BQ8WUY9 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC23.26■■□□□ 1.31
DEPDC1BQ8WUY9 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC23.26■■□□□ 1.31
DEPDC1BQ8WUY9 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC23.26■■□□□ 1.31
DEPDC1BQ8WUY9 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC23.26■■□□□ 1.31
DEPDC1BQ8WUY9 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
DEPDC1BQ8WUY9 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC23.26■■□□□ 1.31
DEPDC1BQ8WUY9 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC23.26■■□□□ 1.31
DEPDC1BQ8WUY9 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC23.25■■□□□ 1.31
DEPDC1BQ8WUY9 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC23.25■■□□□ 1.31
DEPDC1BQ8WUY9 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC23.25■■□□□ 1.31
DEPDC1BQ8WUY9 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC23.25■■□□□ 1.31
DEPDC1BQ8WUY9 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC23.25■■□□□ 1.31
DEPDC1BQ8WUY9 IGHV3-19-201ENST00000521488 291 ntBASIC23.25■■□□□ 1.31
DEPDC1BQ8WUY9 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
DEPDC1BQ8WUY9 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC23.25■■□□□ 1.31
DEPDC1BQ8WUY9 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC23.25■■□□□ 1.31
DEPDC1BQ8WUY9 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC23.25■■□□□ 1.31
DEPDC1BQ8WUY9 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
DEPDC1BQ8WUY9 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC23.24■■□□□ 1.31
DEPDC1BQ8WUY9 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
DEPDC1BQ8WUY9 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
DEPDC1BQ8WUY9 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC23.24■■□□□ 1.31
DEPDC1BQ8WUY9 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC23.24■■□□□ 1.31
DEPDC1BQ8WUY9 AC027612.3-201ENST00000413684 1047 ntBASIC23.24■■□□□ 1.31
DEPDC1BQ8WUY9 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC23.24■■□□□ 1.31
DEPDC1BQ8WUY9 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
DEPDC1BQ8WUY9 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC23.24■■□□□ 1.31
DEPDC1BQ8WUY9 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC23.24■■□□□ 1.31
DEPDC1BQ8WUY9 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
DEPDC1BQ8WUY9 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
DEPDC1BQ8WUY9 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC23.23■■□□□ 1.31
DEPDC1BQ8WUY9 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC23.23■■□□□ 1.31
DEPDC1BQ8WUY9 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
DEPDC1BQ8WUY9 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
DEPDC1BQ8WUY9 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC23.23■■□□□ 1.31
DEPDC1BQ8WUY9 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
DEPDC1BQ8WUY9 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC23.23■■□□□ 1.31
DEPDC1BQ8WUY9 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC23.23■■□□□ 1.31
DEPDC1BQ8WUY9 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
DEPDC1BQ8WUY9 H19-210ENST00000439725 1929 ntTSL 2 BASIC23.22■■□□□ 1.31
DEPDC1BQ8WUY9 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC23.22■■□□□ 1.31
DEPDC1BQ8WUY9 MIR572-201ENST00000384983 95 ntBASIC23.22■■□□□ 1.31
DEPDC1BQ8WUY9 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
DEPDC1BQ8WUY9 AC123595.1-201ENST00000440769 1046 ntBASIC23.22■■□□□ 1.31
DEPDC1BQ8WUY9 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC23.22■■□□□ 1.31
DEPDC1BQ8WUY9 RAB43-208ENST00000615093 783 ntTSL 5 BASIC23.22■■□□□ 1.31
DEPDC1BQ8WUY9 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC23.22■■□□□ 1.31
DEPDC1BQ8WUY9 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC23.22■■□□□ 1.31
DEPDC1BQ8WUY9 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC23.22■■□□□ 1.31
DEPDC1BQ8WUY9 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
DEPDC1BQ8WUY9 HACD1-201ENST00000326961 773 ntTSL 2 BASIC23.21■■□□□ 1.31
DEPDC1BQ8WUY9 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC23.21■■□□□ 1.31
DEPDC1BQ8WUY9 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC23.21■■□□□ 1.31
DEPDC1BQ8WUY9 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC23.21■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 184.6 ms