Protein–RNA interactions for Protein: Q8TB92

HMGCLL1, 3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic, humanhuman

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1Q8TB92 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
HMGCLL1Q8TB92 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
HMGCLL1Q8TB92 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
HMGCLL1Q8TB92 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
HMGCLL1Q8TB92 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC21.71■■□□□ 1.07
HMGCLL1Q8TB92 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
HMGCLL1Q8TB92 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
HMGCLL1Q8TB92 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
HMGCLL1Q8TB92 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
HMGCLL1Q8TB92 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC21.71■■□□□ 1.07
HMGCLL1Q8TB92 AC241377.3-202ENST00000626088 1088 ntBASIC21.71■■□□□ 1.07
HMGCLL1Q8TB92 AC241585.3-202ENST00000628937 1088 ntBASIC21.71■■□□□ 1.07
HMGCLL1Q8TB92 AC245100.8-202ENST00000629247 1058 ntBASIC21.71■■□□□ 1.07
HMGCLL1Q8TB92 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
HMGCLL1Q8TB92 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
HMGCLL1Q8TB92 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
HMGCLL1Q8TB92 WWC2-AS2-201ENST00000578387 2183 ntBASIC21.71■■□□□ 1.07
HMGCLL1Q8TB92 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC21.71■■□□□ 1.07
HMGCLL1Q8TB92 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
HMGCLL1Q8TB92 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
HMGCLL1Q8TB92 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
HMGCLL1Q8TB92 ASB1-202ENST00000409297 878 ntTSL 5 BASIC21.7■■□□□ 1.06
HMGCLL1Q8TB92 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
HMGCLL1Q8TB92 AC008406.3-201ENST00000620001 1374 ntBASIC21.7■■□□□ 1.06
HMGCLL1Q8TB92 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC21.7■■□□□ 1.06
HMGCLL1Q8TB92 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
HMGCLL1Q8TB92 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
HMGCLL1Q8TB92 AC127496.7-201ENST00000625110 1798 ntBASIC21.69■■□□□ 1.06
HMGCLL1Q8TB92 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
HMGCLL1Q8TB92 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
HMGCLL1Q8TB92 AL136116.3-201ENST00000402907 1138 ntBASIC21.69■■□□□ 1.06
HMGCLL1Q8TB92 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
HMGCLL1Q8TB92 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
HMGCLL1Q8TB92 AC079630.1-202ENST00000618127 1840 ntBASIC21.69■■□□□ 1.06
HMGCLL1Q8TB92 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
HMGCLL1Q8TB92 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
HMGCLL1Q8TB92 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
HMGCLL1Q8TB92 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
HMGCLL1Q8TB92 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC21.67■■□□□ 1.06
HMGCLL1Q8TB92 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC21.67■■□□□ 1.06
HMGCLL1Q8TB92 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC21.67■■□□□ 1.06
HMGCLL1Q8TB92 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC21.67■■□□□ 1.06
HMGCLL1Q8TB92 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC21.67■■□□□ 1.06
HMGCLL1Q8TB92 PEMT-206ENST00000435340 960 ntTSL 5 BASIC21.67■■□□□ 1.06
HMGCLL1Q8TB92 DUX4L4-201ENST00000566884 1269 ntBASIC21.67■■□□□ 1.06
HMGCLL1Q8TB92 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC21.67■■□□□ 1.06
HMGCLL1Q8TB92 AC092171.4-201ENST00000609130 632 ntBASIC21.67■■□□□ 1.06
HMGCLL1Q8TB92 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC21.67■■□□□ 1.06
HMGCLL1Q8TB92 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
HMGCLL1Q8TB92 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
HMGCLL1Q8TB92 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
HMGCLL1Q8TB92 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
HMGCLL1Q8TB92 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
HMGCLL1Q8TB92 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC21.66■■□□□ 1.06
HMGCLL1Q8TB92 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC21.66■■□□□ 1.06
HMGCLL1Q8TB92 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC21.66■■□□□ 1.06
HMGCLL1Q8TB92 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
HMGCLL1Q8TB92 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
HMGCLL1Q8TB92 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
HMGCLL1Q8TB92 AC137767.1-201ENST00000602918 1920 ntBASIC21.66■■□□□ 1.06
HMGCLL1Q8TB92 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
HMGCLL1Q8TB92 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC21.66■■□□□ 1.06
HMGCLL1Q8TB92 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
HMGCLL1Q8TB92 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
HMGCLL1Q8TB92 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
HMGCLL1Q8TB92 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
HMGCLL1Q8TB92 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
HMGCLL1Q8TB92 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC21.65■■□□□ 1.06
HMGCLL1Q8TB92 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC21.65■■□□□ 1.06
HMGCLL1Q8TB92 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC21.65■■□□□ 1.06
HMGCLL1Q8TB92 LINC01529-204ENST00000636474 1715 ntBASIC21.65■■□□□ 1.06
HMGCLL1Q8TB92 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
HMGCLL1Q8TB92 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
HMGCLL1Q8TB92 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
HMGCLL1Q8TB92 AC007375.3-201ENST00000600936 2314 ntBASIC21.64■■□□□ 1.06
HMGCLL1Q8TB92 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
HMGCLL1Q8TB92 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC21.64■■□□□ 1.05
HMGCLL1Q8TB92 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
HMGCLL1Q8TB92 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC21.64■■□□□ 1.05
HMGCLL1Q8TB92 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
HMGCLL1Q8TB92 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC21.64■■□□□ 1.05
HMGCLL1Q8TB92 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC21.64■■□□□ 1.05
HMGCLL1Q8TB92 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
HMGCLL1Q8TB92 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
HMGCLL1Q8TB92 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
HMGCLL1Q8TB92 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC21.64■■□□□ 1.05
HMGCLL1Q8TB92 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC21.64■■□□□ 1.05
HMGCLL1Q8TB92 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC21.64■■□□□ 1.05
HMGCLL1Q8TB92 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
HMGCLL1Q8TB92 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
HMGCLL1Q8TB92 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC21.63■■□□□ 1.05
HMGCLL1Q8TB92 DUX4L19-201ENST00000557448 1267 ntBASIC21.63■■□□□ 1.05
HMGCLL1Q8TB92 AC099791.2-201ENST00000605725 427 ntBASIC21.63■■□□□ 1.05
HMGCLL1Q8TB92 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
HMGCLL1Q8TB92 MYB-221ENST00000527615 2381 ntTSL 5 BASIC21.63■■□□□ 1.05
HMGCLL1Q8TB92 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
HMGCLL1Q8TB92 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
HMGCLL1Q8TB92 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC21.62■■□□□ 1.05
HMGCLL1Q8TB92 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
HMGCLL1Q8TB92 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms