Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC25.88■■□□□ 1.73
SMARCC2Q8TAQ2 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC25.88■■□□□ 1.73
SMARCC2Q8TAQ2 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
SMARCC2Q8TAQ2 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC25.88■■□□□ 1.73
SMARCC2Q8TAQ2 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC25.88■■□□□ 1.73
SMARCC2Q8TAQ2 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC25.88■■□□□ 1.73
SMARCC2Q8TAQ2 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
SMARCC2Q8TAQ2 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC25.88■■□□□ 1.73
SMARCC2Q8TAQ2 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
SMARCC2Q8TAQ2 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC25.87■■□□□ 1.73
SMARCC2Q8TAQ2 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
SMARCC2Q8TAQ2 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
SMARCC2Q8TAQ2 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC25.87■■□□□ 1.73
SMARCC2Q8TAQ2 AC127496.7-201ENST00000625110 1798 ntBASIC25.87■■□□□ 1.73
SMARCC2Q8TAQ2 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC25.87■■□□□ 1.73
SMARCC2Q8TAQ2 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC25.87■■□□□ 1.73
SMARCC2Q8TAQ2 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
SMARCC2Q8TAQ2 NKILA-201ENST00000613231 537 ntTSL 4 BASIC25.87■■□□□ 1.73
SMARCC2Q8TAQ2 ECEL1P1-201ENST00000373592 1742 ntBASIC25.87■■□□□ 1.73
SMARCC2Q8TAQ2 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC25.87■■□□□ 1.73
SMARCC2Q8TAQ2 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
SMARCC2Q8TAQ2 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
SMARCC2Q8TAQ2 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
SMARCC2Q8TAQ2 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC25.86■■□□□ 1.73
SMARCC2Q8TAQ2 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC25.86■■□□□ 1.73
SMARCC2Q8TAQ2 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC25.86■■□□□ 1.73
SMARCC2Q8TAQ2 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC25.86■■□□□ 1.73
SMARCC2Q8TAQ2 LSR-203ENST00000360798 1963 ntTSL 2 BASIC25.86■■□□□ 1.73
SMARCC2Q8TAQ2 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC25.85■■□□□ 1.73
SMARCC2Q8TAQ2 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
SMARCC2Q8TAQ2 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC25.85■■□□□ 1.73
SMARCC2Q8TAQ2 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC25.85■■□□□ 1.73
SMARCC2Q8TAQ2 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
SMARCC2Q8TAQ2 UNC93B3-201ENST00000308076 687 ntBASIC25.85■■□□□ 1.73
SMARCC2Q8TAQ2 AC099791.2-201ENST00000605725 427 ntBASIC25.85■■□□□ 1.73
SMARCC2Q8TAQ2 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC25.85■■□□□ 1.73
SMARCC2Q8TAQ2 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
SMARCC2Q8TAQ2 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC25.85■■□□□ 1.73
SMARCC2Q8TAQ2 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC25.85■■□□□ 1.73
SMARCC2Q8TAQ2 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC25.85■■□□□ 1.73
SMARCC2Q8TAQ2 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC25.84■■□□□ 1.73
SMARCC2Q8TAQ2 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
SMARCC2Q8TAQ2 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
SMARCC2Q8TAQ2 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC25.84■■□□□ 1.73
SMARCC2Q8TAQ2 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
SMARCC2Q8TAQ2 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC25.84■■□□□ 1.73
SMARCC2Q8TAQ2 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC25.84■■□□□ 1.73
SMARCC2Q8TAQ2 AC087742.1-201ENST00000575880 1738 ntBASIC25.84■■□□□ 1.73
SMARCC2Q8TAQ2 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC25.84■■□□□ 1.73
SMARCC2Q8TAQ2 AC092171.4-201ENST00000609130 632 ntBASIC25.84■■□□□ 1.73
SMARCC2Q8TAQ2 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC25.84■■□□□ 1.73
SMARCC2Q8TAQ2 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
SMARCC2Q8TAQ2 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
SMARCC2Q8TAQ2 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
SMARCC2Q8TAQ2 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
SMARCC2Q8TAQ2 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC25.83■■□□□ 1.73
SMARCC2Q8TAQ2 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
SMARCC2Q8TAQ2 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC25.83■■□□□ 1.73
SMARCC2Q8TAQ2 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC25.83■■□□□ 1.73
SMARCC2Q8TAQ2 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC25.83■■□□□ 1.73
SMARCC2Q8TAQ2 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.72
SMARCC2Q8TAQ2 LINC00526-201ENST00000581067 1875 ntBASIC25.83■■□□□ 1.72
SMARCC2Q8TAQ2 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
SMARCC2Q8TAQ2 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC25.82■■□□□ 1.72
SMARCC2Q8TAQ2 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC25.82■■□□□ 1.72
SMARCC2Q8TAQ2 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
SMARCC2Q8TAQ2 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
SMARCC2Q8TAQ2 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC25.82■■□□□ 1.72
SMARCC2Q8TAQ2 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
SMARCC2Q8TAQ2 DUX4L19-201ENST00000557448 1267 ntBASIC25.82■■□□□ 1.72
SMARCC2Q8TAQ2 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC25.81■■□□□ 1.72
SMARCC2Q8TAQ2 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC25.81■■□□□ 1.72
SMARCC2Q8TAQ2 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
SMARCC2Q8TAQ2 MIR638-201ENST00000385237 100 ntBASIC25.81■■□□□ 1.72
SMARCC2Q8TAQ2 PBX2P1-201ENST00000493219 1291 ntBASIC25.81■■□□□ 1.72
SMARCC2Q8TAQ2 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
SMARCC2Q8TAQ2 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
SMARCC2Q8TAQ2 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC25.8■■□□□ 1.72
SMARCC2Q8TAQ2 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
SMARCC2Q8TAQ2 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
SMARCC2Q8TAQ2 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
SMARCC2Q8TAQ2 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC25.8■■□□□ 1.72
SMARCC2Q8TAQ2 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
SMARCC2Q8TAQ2 AL136162.1-201ENST00000607711 1078 ntBASIC25.8■■□□□ 1.72
SMARCC2Q8TAQ2 AC241377.3-202ENST00000626088 1088 ntBASIC25.8■■□□□ 1.72
SMARCC2Q8TAQ2 AC241585.3-202ENST00000628937 1088 ntBASIC25.8■■□□□ 1.72
SMARCC2Q8TAQ2 AC245100.8-202ENST00000629247 1058 ntBASIC25.8■■□□□ 1.72
SMARCC2Q8TAQ2 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC25.79■■□□□ 1.72
SMARCC2Q8TAQ2 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC25.79■■□□□ 1.72
SMARCC2Q8TAQ2 SYT6-210ENST00000641643 1587 ntBASIC25.79■■□□□ 1.72
SMARCC2Q8TAQ2 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC25.79■■□□□ 1.72
SMARCC2Q8TAQ2 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC25.79■■□□□ 1.72
SMARCC2Q8TAQ2 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC25.79■■□□□ 1.72
SMARCC2Q8TAQ2 AC242852.2-201ENST00000615738 1807 ntBASIC25.79■■□□□ 1.72
SMARCC2Q8TAQ2 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
SMARCC2Q8TAQ2 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
SMARCC2Q8TAQ2 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC25.78■■□□□ 1.72
SMARCC2Q8TAQ2 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC25.78■■□□□ 1.72
SMARCC2Q8TAQ2 VGF-203ENST00000611537 1622 ntTSL 5 BASIC25.78■■□□□ 1.72
SMARCC2Q8TAQ2 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC25.78■■□□□ 1.72
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms