Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 MPST-208ENST00000628507 698 ntTSL 5 BASIC18.69■□□□□ 0.58
CLDND2Q8NHS1 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CLDND2Q8NHS1 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC18.69■□□□□ 0.58
CLDND2Q8NHS1 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CLDND2Q8NHS1 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC18.69■□□□□ 0.58
CLDND2Q8NHS1 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLDND2Q8NHS1 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLDND2Q8NHS1 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CLDND2Q8NHS1 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CLDND2Q8NHS1 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CLDND2Q8NHS1 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CLDND2Q8NHS1 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CLDND2Q8NHS1 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
CLDND2Q8NHS1 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CLDND2Q8NHS1 IRS3P-201ENST00000223076 1006 ntBASIC18.68■□□□□ 0.58
CLDND2Q8NHS1 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CLDND2Q8NHS1 SNX3-202ENST00000349379 890 ntTSL 2 BASIC18.68■□□□□ 0.58
CLDND2Q8NHS1 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC18.68■□□□□ 0.58
CLDND2Q8NHS1 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC18.68■□□□□ 0.58
CLDND2Q8NHS1 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CLDND2Q8NHS1 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CLDND2Q8NHS1 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
CLDND2Q8NHS1 MIR5787-201ENST00000611784 55 ntBASIC18.68■□□□□ 0.58
CLDND2Q8NHS1 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CLDND2Q8NHS1 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
CLDND2Q8NHS1 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CLDND2Q8NHS1 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLDND2Q8NHS1 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLDND2Q8NHS1 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CLDND2Q8NHS1 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLDND2Q8NHS1 EI24-213ENST00000618552 1747 ntTSL 5 BASIC18.67■□□□□ 0.58
CLDND2Q8NHS1 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
CLDND2Q8NHS1 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC18.67■□□□□ 0.58
CLDND2Q8NHS1 RHOF-204ENST00000537265 699 ntTSL 2 BASIC18.67■□□□□ 0.58
CLDND2Q8NHS1 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLDND2Q8NHS1 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC18.67■□□□□ 0.58
CLDND2Q8NHS1 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CLDND2Q8NHS1 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
CLDND2Q8NHS1 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLDND2Q8NHS1 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC18.67■□□□□ 0.58
CLDND2Q8NHS1 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC18.66■□□□□ 0.58
CLDND2Q8NHS1 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CLDND2Q8NHS1 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CLDND2Q8NHS1 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
CLDND2Q8NHS1 AC126544.1-201ENST00000580842 1059 ntBASIC18.66■□□□□ 0.58
CLDND2Q8NHS1 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CLDND2Q8NHS1 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CLDND2Q8NHS1 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CLDND2Q8NHS1 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC18.65■□□□□ 0.58
CLDND2Q8NHS1 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
CLDND2Q8NHS1 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC18.65■□□□□ 0.58
CLDND2Q8NHS1 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CLDND2Q8NHS1 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLDND2Q8NHS1 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLDND2Q8NHS1 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLDND2Q8NHS1 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLDND2Q8NHS1 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC18.65■□□□□ 0.58
CLDND2Q8NHS1 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CLDND2Q8NHS1 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLDND2Q8NHS1 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CLDND2Q8NHS1 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLDND2Q8NHS1 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
CLDND2Q8NHS1 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC18.64■□□□□ 0.57
CLDND2Q8NHS1 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC18.64■□□□□ 0.57
CLDND2Q8NHS1 MIR6821-201ENST00000617625 74 ntBASIC18.64■□□□□ 0.57
CLDND2Q8NHS1 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC18.64■□□□□ 0.57
CLDND2Q8NHS1 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CLDND2Q8NHS1 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLDND2Q8NHS1 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLDND2Q8NHS1 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
CLDND2Q8NHS1 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLDND2Q8NHS1 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLDND2Q8NHS1 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC18.63■□□□□ 0.57
CLDND2Q8NHS1 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CLDND2Q8NHS1 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLDND2Q8NHS1 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC18.63■□□□□ 0.57
CLDND2Q8NHS1 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLDND2Q8NHS1 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
CLDND2Q8NHS1 SLC47A1P1-202ENST00000449666 945 ntBASIC18.63■□□□□ 0.57
CLDND2Q8NHS1 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC18.63■□□□□ 0.57
CLDND2Q8NHS1 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC18.63■□□□□ 0.57
CLDND2Q8NHS1 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CLDND2Q8NHS1 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC18.63■□□□□ 0.57
CLDND2Q8NHS1 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLDND2Q8NHS1 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLDND2Q8NHS1 NFE2L3P1-201ENST00000588207 1959 ntBASIC18.62■□□□□ 0.57
CLDND2Q8NHS1 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLDND2Q8NHS1 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLDND2Q8NHS1 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC18.62■□□□□ 0.57
CLDND2Q8NHS1 AC097381.1-201ENST00000429019 1296 ntBASIC18.62■□□□□ 0.57
CLDND2Q8NHS1 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLDND2Q8NHS1 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC18.62■□□□□ 0.57
CLDND2Q8NHS1 AC092666.2-201ENST00000613287 246 ntBASIC18.62■□□□□ 0.57
CLDND2Q8NHS1 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC18.62■□□□□ 0.57
CLDND2Q8NHS1 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CLDND2Q8NHS1 AC133637.1-201ENST00000624115 1537 ntBASIC18.62■□□□□ 0.57
CLDND2Q8NHS1 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CLDND2Q8NHS1 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC18.62■□□□□ 0.57
CLDND2Q8NHS1 AC004812.2-201ENST00000611079 2094 ntBASIC18.62■□□□□ 0.57
CLDND2Q8NHS1 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 80.4 ms