Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CPEB3Q8NE35 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC19.28■□□□□ 0.68
CPEB3Q8NE35 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CPEB3Q8NE35 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
CPEB3Q8NE35 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CPEB3Q8NE35 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CPEB3Q8NE35 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
CPEB3Q8NE35 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC19.27■□□□□ 0.68
CPEB3Q8NE35 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CPEB3Q8NE35 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
CPEB3Q8NE35 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC19.27■□□□□ 0.68
CPEB3Q8NE35 AC004687.1-201ENST00000579003 1625 ntBASIC19.27■□□□□ 0.68
CPEB3Q8NE35 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CPEB3Q8NE35 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CPEB3Q8NE35 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CPEB3Q8NE35 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC19.27■□□□□ 0.68
CPEB3Q8NE35 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CPEB3Q8NE35 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
CPEB3Q8NE35 SYT6-210ENST00000641643 1587 ntBASIC19.27■□□□□ 0.67
CPEB3Q8NE35 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CPEB3Q8NE35 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
CPEB3Q8NE35 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
CPEB3Q8NE35 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CPEB3Q8NE35 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CPEB3Q8NE35 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CPEB3Q8NE35 SERBP1P1-201ENST00000396021 1160 ntBASIC19.26■□□□□ 0.67
CPEB3Q8NE35 PTCHD3P2-201ENST00000424937 1205 ntBASIC19.26■□□□□ 0.67
CPEB3Q8NE35 DUX4L19-201ENST00000557448 1267 ntBASIC19.26■□□□□ 0.67
CPEB3Q8NE35 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CPEB3Q8NE35 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
CPEB3Q8NE35 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC19.26■□□□□ 0.67
CPEB3Q8NE35 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CPEB3Q8NE35 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CPEB3Q8NE35 GALC-202ENST00000393568 2054 ntTSL 2 BASIC19.26■□□□□ 0.67
CPEB3Q8NE35 AC133637.1-201ENST00000624115 1537 ntBASIC19.25■□□□□ 0.67
CPEB3Q8NE35 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CPEB3Q8NE35 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC19.25■□□□□ 0.67
CPEB3Q8NE35 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
CPEB3Q8NE35 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CPEB3Q8NE35 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CPEB3Q8NE35 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CPEB3Q8NE35 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CPEB3Q8NE35 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CPEB3Q8NE35 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC19.25■□□□□ 0.67
CPEB3Q8NE35 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
CPEB3Q8NE35 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CPEB3Q8NE35 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CPEB3Q8NE35 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC19.25■□□□□ 0.67
CPEB3Q8NE35 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CPEB3Q8NE35 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CPEB3Q8NE35 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC19.24■□□□□ 0.67
CPEB3Q8NE35 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CPEB3Q8NE35 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC19.24■□□□□ 0.67
CPEB3Q8NE35 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC19.24■□□□□ 0.67
CPEB3Q8NE35 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CPEB3Q8NE35 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
CPEB3Q8NE35 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC19.24■□□□□ 0.67
CPEB3Q8NE35 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CPEB3Q8NE35 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CPEB3Q8NE35 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC19.24■□□□□ 0.67
CPEB3Q8NE35 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC19.24■□□□□ 0.67
CPEB3Q8NE35 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC19.24■□□□□ 0.67
CPEB3Q8NE35 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC19.23■□□□□ 0.67
CPEB3Q8NE35 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
CPEB3Q8NE35 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CPEB3Q8NE35 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CPEB3Q8NE35 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CPEB3Q8NE35 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
CPEB3Q8NE35 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CPEB3Q8NE35 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC19.23■□□□□ 0.67
CPEB3Q8NE35 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
CPEB3Q8NE35 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC19.23■□□□□ 0.67
CPEB3Q8NE35 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CPEB3Q8NE35 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CPEB3Q8NE35 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CPEB3Q8NE35 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CPEB3Q8NE35 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC19.22■□□□□ 0.67
CPEB3Q8NE35 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CPEB3Q8NE35 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC19.22■□□□□ 0.67
CPEB3Q8NE35 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CPEB3Q8NE35 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CPEB3Q8NE35 UNC93B3-201ENST00000308076 687 ntBASIC19.22■□□□□ 0.67
CPEB3Q8NE35 HES6-206ENST00000409574 738 ntTSL 2 BASIC19.22■□□□□ 0.67
CPEB3Q8NE35 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC19.22■□□□□ 0.67
CPEB3Q8NE35 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC19.22■□□□□ 0.67
CPEB3Q8NE35 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CPEB3Q8NE35 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC19.22■□□□□ 0.67
CPEB3Q8NE35 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC19.22■□□□□ 0.67
CPEB3Q8NE35 SF1-220ENST00000626028 704 ntTSL 2 BASIC19.22■□□□□ 0.67
CPEB3Q8NE35 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
CPEB3Q8NE35 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
CPEB3Q8NE35 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CPEB3Q8NE35 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
CPEB3Q8NE35 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC19.21■□□□□ 0.67
CPEB3Q8NE35 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
CPEB3Q8NE35 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CPEB3Q8NE35 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC19.21■□□□□ 0.67
CPEB3Q8NE35 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CPEB3Q8NE35 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC19.21■□□□□ 0.67
CPEB3Q8NE35 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms