Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 AC010525.1-201ENST00000585559 441 ntBASIC34.99■■■■□ 3.19
CFAP43Q8NDM7 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC34.99■■■■□ 3.19
CFAP43Q8NDM7 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC34.99■■■■□ 3.19
CFAP43Q8NDM7 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC34.99■■■■□ 3.19
CFAP43Q8NDM7 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC34.99■■■■□ 3.19
CFAP43Q8NDM7 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC34.98■■■■□ 3.19
CFAP43Q8NDM7 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC34.98■■■■□ 3.19
CFAP43Q8NDM7 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC34.98■■■■□ 3.19
CFAP43Q8NDM7 LHPP-203ENST00000392757 840 ntTSL 3 BASIC34.98■■■■□ 3.19
CFAP43Q8NDM7 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC34.98■■■■□ 3.19
CFAP43Q8NDM7 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC34.98■■■■□ 3.19
CFAP43Q8NDM7 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC34.98■■■■□ 3.19
CFAP43Q8NDM7 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC34.98■■■■□ 3.19
CFAP43Q8NDM7 DBI-210ENST00000542275 757 ntTSL 5 BASIC34.98■■■■□ 3.19
CFAP43Q8NDM7 AC079630.1-202ENST00000618127 1840 ntBASIC34.98■■■■□ 3.19
CFAP43Q8NDM7 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC34.98■■■■□ 3.19
CFAP43Q8NDM7 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC34.97■■■■□ 3.19
CFAP43Q8NDM7 AP005435.1-201ENST00000529293 1178 ntBASIC34.97■■■■□ 3.19
CFAP43Q8NDM7 AC066615.1-201ENST00000640911 628 ntBASIC34.97■■■■□ 3.19
CFAP43Q8NDM7 MPST-204ENST00000404393 1329 ntTSL 5 BASIC34.97■■■■□ 3.19
CFAP43Q8NDM7 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC34.97■■■■□ 3.19
CFAP43Q8NDM7 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC34.97■■■■□ 3.19
CFAP43Q8NDM7 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC34.97■■■■□ 3.19
CFAP43Q8NDM7 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC34.96■■■■□ 3.19
CFAP43Q8NDM7 MIR663A-201ENST00000385250 93 ntBASIC34.96■■■■□ 3.19
CFAP43Q8NDM7 MAP2K4P1-201ENST00000438453 1195 ntBASIC34.96■■■■□ 3.19
CFAP43Q8NDM7 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC34.96■■■■□ 3.19
CFAP43Q8NDM7 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC34.96■■■■□ 3.19
CFAP43Q8NDM7 TPRG1LP1-201ENST00000598702 760 ntBASIC34.96■■■■□ 3.19
CFAP43Q8NDM7 WWOX-218ENST00000627394 894 ntTSL 5 BASIC34.96■■■■□ 3.19
CFAP43Q8NDM7 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC34.96■■■■□ 3.19
CFAP43Q8NDM7 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC34.96■■■■□ 3.19
CFAP43Q8NDM7 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC34.95■■■■□ 3.19
CFAP43Q8NDM7 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC34.95■■■■□ 3.19
CFAP43Q8NDM7 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC34.95■■■■□ 3.19
CFAP43Q8NDM7 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC34.95■■■■□ 3.19
CFAP43Q8NDM7 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC34.95■■■■□ 3.19
CFAP43Q8NDM7 AC004812.2-201ENST00000611079 2094 ntBASIC34.95■■■■□ 3.19
CFAP43Q8NDM7 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC34.95■■■■□ 3.18
CFAP43Q8NDM7 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC34.95■■■■□ 3.18
CFAP43Q8NDM7 AL109923.1-201ENST00000618799 583 ntBASIC34.95■■■■□ 3.18
CFAP43Q8NDM7 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC34.95■■■■□ 3.18
CFAP43Q8NDM7 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC34.95■■■■□ 3.18
CFAP43Q8NDM7 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC34.94■■■■□ 3.18
CFAP43Q8NDM7 STX7-201ENST00000367937 1090 ntTSL 5 BASIC34.94■■■■□ 3.18
CFAP43Q8NDM7 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC34.94■■■■□ 3.18
CFAP43Q8NDM7 TMEM191A-211ENST00000637163 1067 ntBASIC34.94■■■■□ 3.18
CFAP43Q8NDM7 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC34.94■■■■□ 3.18
CFAP43Q8NDM7 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC34.93■■■■□ 3.18
CFAP43Q8NDM7 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC34.93■■■■□ 3.18
CFAP43Q8NDM7 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC34.93■■■■□ 3.18
CFAP43Q8NDM7 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC34.93■■■■□ 3.18
CFAP43Q8NDM7 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC34.93■■■■□ 3.18
CFAP43Q8NDM7 AC133637.1-201ENST00000624115 1537 ntBASIC34.93■■■■□ 3.18
CFAP43Q8NDM7 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC34.92■■■■□ 3.18
CFAP43Q8NDM7 GALNS-213ENST00000569433 723 ntTSL 3 BASIC34.92■■■■□ 3.18
CFAP43Q8NDM7 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC34.92■■■■□ 3.18
CFAP43Q8NDM7 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC34.92■■■■□ 3.18
CFAP43Q8NDM7 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC34.92■■■■□ 3.18
CFAP43Q8NDM7 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC34.92■■■■□ 3.18
CFAP43Q8NDM7 AC006970.2-201ENST00000450065 779 ntBASIC34.92■■■■□ 3.18
CFAP43Q8NDM7 DUX4L4-201ENST00000566884 1269 ntBASIC34.92■■■■□ 3.18
CFAP43Q8NDM7 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC34.92■■■■□ 3.18
CFAP43Q8NDM7 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC34.92■■■■□ 3.18
CFAP43Q8NDM7 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC34.92■■■■□ 3.18
CFAP43Q8NDM7 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC34.91■■■■□ 3.18
CFAP43Q8NDM7 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC34.91■■■■□ 3.18
CFAP43Q8NDM7 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC34.91■■■■□ 3.18
CFAP43Q8NDM7 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC34.91■■■■□ 3.18
CFAP43Q8NDM7 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC34.91■■■■□ 3.18
CFAP43Q8NDM7 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC34.91■■■■□ 3.18
CFAP43Q8NDM7 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC34.9■■■■□ 3.18
CFAP43Q8NDM7 NCF1B-203ENST00000435988 1254 ntBASIC34.9■■■■□ 3.18
CFAP43Q8NDM7 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC34.9■■■■□ 3.18
CFAP43Q8NDM7 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC34.9■■■■□ 3.18
CFAP43Q8NDM7 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC34.9■■■■□ 3.18
CFAP43Q8NDM7 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC34.89■■■■□ 3.18
CFAP43Q8NDM7 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC34.89■■■■□ 3.18
CFAP43Q8NDM7 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC34.89■■■■□ 3.18
CFAP43Q8NDM7 BID-214ENST00000617586 542 ntTSL 5 BASIC34.89■■■■□ 3.18
CFAP43Q8NDM7 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC34.88■■■■□ 3.17
CFAP43Q8NDM7 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC34.88■■■■□ 3.17
CFAP43Q8NDM7 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC34.88■■■■□ 3.17
CFAP43Q8NDM7 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC34.88■■■■□ 3.17
CFAP43Q8NDM7 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC34.87■■■■□ 3.17
CFAP43Q8NDM7 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC34.87■■■■□ 3.17
CFAP43Q8NDM7 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC34.87■■■■□ 3.17
CFAP43Q8NDM7 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC34.87■■■■□ 3.17
CFAP43Q8NDM7 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC34.87■■■■□ 3.17
CFAP43Q8NDM7 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC34.86■■■■□ 3.17
CFAP43Q8NDM7 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC34.86■■■■□ 3.17
CFAP43Q8NDM7 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC34.86■■■■□ 3.17
CFAP43Q8NDM7 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC34.86■■■■□ 3.17
CFAP43Q8NDM7 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC34.86■■■■□ 3.17
CFAP43Q8NDM7 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC34.86■■■■□ 3.17
CFAP43Q8NDM7 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC34.86■■■■□ 3.17
CFAP43Q8NDM7 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC34.86■■■■□ 3.17
CFAP43Q8NDM7 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC34.85■■■■□ 3.17
CFAP43Q8NDM7 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC34.85■■■■□ 3.17
CFAP43Q8NDM7 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC34.85■■■■□ 3.17
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms