Protein–RNA interactions for Protein: Q8N9H8

EXD3, Exonuclease mut-7 homolog, humanhuman

Predictions only

Length 876 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXD3Q8N9H8 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC20.78■□□□□ 0.92
EXD3Q8N9H8 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
EXD3Q8N9H8 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC20.78■□□□□ 0.92
EXD3Q8N9H8 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
EXD3Q8N9H8 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC20.78■□□□□ 0.92
EXD3Q8N9H8 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC20.78■□□□□ 0.92
EXD3Q8N9H8 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC20.78■□□□□ 0.92
EXD3Q8N9H8 AC006015.1-201ENST00000429970 570 ntBASIC20.78■□□□□ 0.92
EXD3Q8N9H8 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
EXD3Q8N9H8 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC20.78■□□□□ 0.92
EXD3Q8N9H8 AC104771.1-201ENST00000603335 964 ntBASIC20.78■□□□□ 0.92
EXD3Q8N9H8 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC20.78■□□□□ 0.92
EXD3Q8N9H8 AL022069.1-201ENST00000568025 1636 ntBASIC20.78■□□□□ 0.92
EXD3Q8N9H8 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
EXD3Q8N9H8 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC20.77■□□□□ 0.92
EXD3Q8N9H8 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
EXD3Q8N9H8 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
EXD3Q8N9H8 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
EXD3Q8N9H8 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC20.77■□□□□ 0.92
EXD3Q8N9H8 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
EXD3Q8N9H8 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC20.77■□□□□ 0.92
EXD3Q8N9H8 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC20.77■□□□□ 0.92
EXD3Q8N9H8 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC20.77■□□□□ 0.92
EXD3Q8N9H8 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
EXD3Q8N9H8 AC073111.5-205ENST00000641717 521 ntBASIC20.77■□□□□ 0.92
EXD3Q8N9H8 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
EXD3Q8N9H8 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC20.77■□□□□ 0.92
EXD3Q8N9H8 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC20.77■□□□□ 0.91
EXD3Q8N9H8 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
EXD3Q8N9H8 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
EXD3Q8N9H8 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
EXD3Q8N9H8 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
EXD3Q8N9H8 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
EXD3Q8N9H8 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
EXD3Q8N9H8 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC20.76■□□□□ 0.91
EXD3Q8N9H8 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC20.76■□□□□ 0.91
EXD3Q8N9H8 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
EXD3Q8N9H8 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC20.76■□□□□ 0.91
EXD3Q8N9H8 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
EXD3Q8N9H8 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
EXD3Q8N9H8 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
EXD3Q8N9H8 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
EXD3Q8N9H8 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
EXD3Q8N9H8 MAP2K4P1-201ENST00000438453 1195 ntBASIC20.75■□□□□ 0.91
EXD3Q8N9H8 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC20.75■□□□□ 0.91
EXD3Q8N9H8 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC20.75■□□□□ 0.91
EXD3Q8N9H8 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
EXD3Q8N9H8 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
EXD3Q8N9H8 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
EXD3Q8N9H8 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
EXD3Q8N9H8 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC20.74■□□□□ 0.91
EXD3Q8N9H8 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
EXD3Q8N9H8 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
EXD3Q8N9H8 PPP1R14BP3-201ENST00000509033 445 ntBASIC20.74■□□□□ 0.91
EXD3Q8N9H8 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC20.74■□□□□ 0.91
EXD3Q8N9H8 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
EXD3Q8N9H8 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
EXD3Q8N9H8 KRT18P61-201ENST00000585825 1298 ntBASIC20.74■□□□□ 0.91
EXD3Q8N9H8 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
EXD3Q8N9H8 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC20.74■□□□□ 0.91
EXD3Q8N9H8 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
EXD3Q8N9H8 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC20.74■□□□□ 0.91
EXD3Q8N9H8 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
EXD3Q8N9H8 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
EXD3Q8N9H8 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
EXD3Q8N9H8 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
EXD3Q8N9H8 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC20.73■□□□□ 0.91
EXD3Q8N9H8 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
EXD3Q8N9H8 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC20.73■□□□□ 0.91
EXD3Q8N9H8 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
EXD3Q8N9H8 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC20.73■□□□□ 0.91
EXD3Q8N9H8 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC20.73■□□□□ 0.91
EXD3Q8N9H8 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
EXD3Q8N9H8 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
EXD3Q8N9H8 ABCB10P4-201ENST00000566803 2184 ntBASIC20.72■□□□□ 0.91
EXD3Q8N9H8 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC20.72■□□□□ 0.91
EXD3Q8N9H8 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
EXD3Q8N9H8 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
EXD3Q8N9H8 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
EXD3Q8N9H8 NT5C3AP1-201ENST00000394500 1012 ntBASIC20.72■□□□□ 0.91
EXD3Q8N9H8 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
EXD3Q8N9H8 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC20.72■□□□□ 0.91
EXD3Q8N9H8 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC20.72■□□□□ 0.91
EXD3Q8N9H8 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
EXD3Q8N9H8 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC20.71■□□□□ 0.91
EXD3Q8N9H8 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
EXD3Q8N9H8 AC026185.1-201ENST00000445748 174 ntBASIC20.71■□□□□ 0.91
EXD3Q8N9H8 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC20.71■□□□□ 0.91
EXD3Q8N9H8 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC20.71■□□□□ 0.91
EXD3Q8N9H8 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC20.71■□□□□ 0.91
EXD3Q8N9H8 AC066615.1-201ENST00000640911 628 ntBASIC20.71■□□□□ 0.91
EXD3Q8N9H8 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
EXD3Q8N9H8 CASK-201ENST00000378154 2494 ntTSL 5 BASIC20.71■□□□□ 0.91
EXD3Q8N9H8 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC20.71■□□□□ 0.91
EXD3Q8N9H8 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC20.71■□□□□ 0.91
EXD3Q8N9H8 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
EXD3Q8N9H8 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.91
EXD3Q8N9H8 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC20.7■□□□□ 0.9
EXD3Q8N9H8 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
EXD3Q8N9H8 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms