Protein–RNA interactions for Protein: Q8N2R8

FAM43A, Protein FAM43A, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM43AQ8N2R8 SP2-202ENST00000613139 908 ntTSL 5 BASIC26.78■■□□□ 1.88
FAM43AQ8N2R8 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
FAM43AQ8N2R8 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC26.78■■□□□ 1.88
FAM43AQ8N2R8 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC26.78■■□□□ 1.88
FAM43AQ8N2R8 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
FAM43AQ8N2R8 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC26.77■■□□□ 1.88
FAM43AQ8N2R8 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC26.77■■□□□ 1.88
FAM43AQ8N2R8 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC26.77■■□□□ 1.88
FAM43AQ8N2R8 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
FAM43AQ8N2R8 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
FAM43AQ8N2R8 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
FAM43AQ8N2R8 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC26.77■■□□□ 1.88
FAM43AQ8N2R8 AC009102.2-201ENST00000606772 1639 ntBASIC26.76■■□□□ 1.87
FAM43AQ8N2R8 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
FAM43AQ8N2R8 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
FAM43AQ8N2R8 WWC2-AS2-201ENST00000578387 2183 ntBASIC26.76■■□□□ 1.87
FAM43AQ8N2R8 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC26.76■■□□□ 1.87
FAM43AQ8N2R8 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
FAM43AQ8N2R8 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC26.76■■□□□ 1.87
FAM43AQ8N2R8 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
FAM43AQ8N2R8 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
FAM43AQ8N2R8 AC131274.2-201ENST00000580697 1507 ntBASIC26.75■■□□□ 1.87
FAM43AQ8N2R8 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC26.75■■□□□ 1.87
FAM43AQ8N2R8 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC26.75■■□□□ 1.87
FAM43AQ8N2R8 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
FAM43AQ8N2R8 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
FAM43AQ8N2R8 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
FAM43AQ8N2R8 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC26.75■■□□□ 1.87
FAM43AQ8N2R8 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC26.75■■□□□ 1.87
FAM43AQ8N2R8 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC26.75■■□□□ 1.87
FAM43AQ8N2R8 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC26.75■■□□□ 1.87
FAM43AQ8N2R8 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC26.75■■□□□ 1.87
FAM43AQ8N2R8 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC26.75■■□□□ 1.87
FAM43AQ8N2R8 AP003733.4-201ENST00000623785 1697 ntBASIC26.75■■□□□ 1.87
FAM43AQ8N2R8 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC26.74■■□□□ 1.87
FAM43AQ8N2R8 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
FAM43AQ8N2R8 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC26.74■■□□□ 1.87
FAM43AQ8N2R8 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
FAM43AQ8N2R8 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
FAM43AQ8N2R8 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC26.74■■□□□ 1.87
FAM43AQ8N2R8 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC26.74■■□□□ 1.87
FAM43AQ8N2R8 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
FAM43AQ8N2R8 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
FAM43AQ8N2R8 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC26.74■■□□□ 1.87
FAM43AQ8N2R8 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC26.74■■□□□ 1.87
FAM43AQ8N2R8 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
FAM43AQ8N2R8 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
FAM43AQ8N2R8 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC26.74■■□□□ 1.87
FAM43AQ8N2R8 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
FAM43AQ8N2R8 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC26.73■■□□□ 1.87
FAM43AQ8N2R8 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
FAM43AQ8N2R8 HES6-206ENST00000409574 738 ntTSL 2 BASIC26.73■■□□□ 1.87
FAM43AQ8N2R8 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC26.73■■□□□ 1.87
FAM43AQ8N2R8 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC26.73■■□□□ 1.87
FAM43AQ8N2R8 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC26.73■■□□□ 1.87
FAM43AQ8N2R8 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
FAM43AQ8N2R8 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC26.73■■□□□ 1.87
FAM43AQ8N2R8 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
FAM43AQ8N2R8 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC26.72■■□□□ 1.87
FAM43AQ8N2R8 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
FAM43AQ8N2R8 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC26.72■■□□□ 1.87
FAM43AQ8N2R8 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC26.72■■□□□ 1.87
FAM43AQ8N2R8 AC022517.1-201ENST00000592429 346 ntBASIC26.72■■□□□ 1.87
FAM43AQ8N2R8 AC136469.2-201ENST00000623944 1028 ntBASIC26.72■■□□□ 1.87
FAM43AQ8N2R8 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC26.72■■□□□ 1.87
FAM43AQ8N2R8 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC26.72■■□□□ 1.87
FAM43AQ8N2R8 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
FAM43AQ8N2R8 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
FAM43AQ8N2R8 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
FAM43AQ8N2R8 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
FAM43AQ8N2R8 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
FAM43AQ8N2R8 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
FAM43AQ8N2R8 ASB1-202ENST00000409297 878 ntTSL 5 BASIC26.71■■□□□ 1.87
FAM43AQ8N2R8 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC26.71■■□□□ 1.87
FAM43AQ8N2R8 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
FAM43AQ8N2R8 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
FAM43AQ8N2R8 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
FAM43AQ8N2R8 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC26.71■■□□□ 1.87
FAM43AQ8N2R8 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC26.71■■□□□ 1.87
FAM43AQ8N2R8 RNF165-205ENST00000588679 2904 ntBASIC26.71■■□□□ 1.87
FAM43AQ8N2R8 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
FAM43AQ8N2R8 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
FAM43AQ8N2R8 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.87
FAM43AQ8N2R8 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC26.7■■□□□ 1.87
FAM43AQ8N2R8 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC26.7■■□□□ 1.87
FAM43AQ8N2R8 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.87
FAM43AQ8N2R8 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC26.7■■□□□ 1.87
FAM43AQ8N2R8 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
FAM43AQ8N2R8 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
FAM43AQ8N2R8 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC26.7■■□□□ 1.86
FAM43AQ8N2R8 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC26.7■■□□□ 1.86
FAM43AQ8N2R8 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
FAM43AQ8N2R8 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
FAM43AQ8N2R8 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC26.7■■□□□ 1.86
FAM43AQ8N2R8 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
FAM43AQ8N2R8 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
FAM43AQ8N2R8 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC26.69■■□□□ 1.86
FAM43AQ8N2R8 HACD1-201ENST00000326961 773 ntTSL 2 BASIC26.69■■□□□ 1.86
FAM43AQ8N2R8 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC26.69■■□□□ 1.86
FAM43AQ8N2R8 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC26.69■■□□□ 1.86
Retrieved 100 of 98,524 protein–RNA pairs in 15 ms