Protein–RNA interactions for Protein: Q8IWR1

TRIM59, Tripartite motif-containing protein 59, humanhuman

Predictions only

Length 403 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59Q8IWR1 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC24.05■■□□□ 1.44
TRIM59Q8IWR1 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
TRIM59Q8IWR1 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC24.04■■□□□ 1.44
TRIM59Q8IWR1 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
TRIM59Q8IWR1 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC24.04■■□□□ 1.44
TRIM59Q8IWR1 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
TRIM59Q8IWR1 AC004687.1-201ENST00000579003 1625 ntBASIC24.04■■□□□ 1.44
TRIM59Q8IWR1 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC24.04■■□□□ 1.44
TRIM59Q8IWR1 AK3-203ENST00000447596 705 ntTSL 2 BASIC24.04■■□□□ 1.44
TRIM59Q8IWR1 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC24.04■■□□□ 1.44
TRIM59Q8IWR1 MIR3621-201ENST00000580529 85 ntBASIC24.04■■□□□ 1.44
TRIM59Q8IWR1 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
TRIM59Q8IWR1 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
TRIM59Q8IWR1 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
TRIM59Q8IWR1 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
TRIM59Q8IWR1 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
TRIM59Q8IWR1 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC24.03■■□□□ 1.44
TRIM59Q8IWR1 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC24.03■■□□□ 1.44
TRIM59Q8IWR1 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
TRIM59Q8IWR1 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
TRIM59Q8IWR1 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC24.03■■□□□ 1.44
TRIM59Q8IWR1 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
TRIM59Q8IWR1 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC24.03■■□□□ 1.44
TRIM59Q8IWR1 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC24.02■■□□□ 1.44
TRIM59Q8IWR1 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
TRIM59Q8IWR1 LINC01960-201ENST00000563759 1884 ntBASIC24.02■■□□□ 1.44
TRIM59Q8IWR1 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
TRIM59Q8IWR1 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
TRIM59Q8IWR1 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC24.02■■□□□ 1.44
TRIM59Q8IWR1 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC24.02■■□□□ 1.44
TRIM59Q8IWR1 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC24.02■■□□□ 1.44
TRIM59Q8IWR1 GTSE1-AS1-202ENST00000623117 1518 ntBASIC24.02■■□□□ 1.44
TRIM59Q8IWR1 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC24.02■■□□□ 1.44
TRIM59Q8IWR1 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC24.02■■□□□ 1.44
TRIM59Q8IWR1 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
TRIM59Q8IWR1 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
TRIM59Q8IWR1 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
TRIM59Q8IWR1 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC24.01■■□□□ 1.43
TRIM59Q8IWR1 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC24.01■■□□□ 1.43
TRIM59Q8IWR1 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
TRIM59Q8IWR1 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
TRIM59Q8IWR1 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC24.01■■□□□ 1.43
TRIM59Q8IWR1 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC24.01■■□□□ 1.43
TRIM59Q8IWR1 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
TRIM59Q8IWR1 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC24.01■■□□□ 1.43
TRIM59Q8IWR1 GRAMD4P7-201ENST00000578182 1232 ntBASIC24.01■■□□□ 1.43
TRIM59Q8IWR1 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC24.01■■□□□ 1.43
TRIM59Q8IWR1 RASSF1-AS1-201ENST00000629828 790 ntBASIC24.01■■□□□ 1.43
TRIM59Q8IWR1 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC24.01■■□□□ 1.43
TRIM59Q8IWR1 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
TRIM59Q8IWR1 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC24.01■■□□□ 1.43
TRIM59Q8IWR1 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC24■■□□□ 1.43
TRIM59Q8IWR1 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC24■■□□□ 1.43
TRIM59Q8IWR1 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
TRIM59Q8IWR1 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
TRIM59Q8IWR1 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC24■■□□□ 1.43
TRIM59Q8IWR1 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC24■■□□□ 1.43
TRIM59Q8IWR1 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
TRIM59Q8IWR1 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC24■■□□□ 1.43
TRIM59Q8IWR1 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC24■■□□□ 1.43
TRIM59Q8IWR1 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC24■■□□□ 1.43
TRIM59Q8IWR1 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC24■■□□□ 1.43
TRIM59Q8IWR1 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
TRIM59Q8IWR1 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC23.99■■□□□ 1.43
TRIM59Q8IWR1 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
TRIM59Q8IWR1 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC23.99■■□□□ 1.43
TRIM59Q8IWR1 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
TRIM59Q8IWR1 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC23.99■■□□□ 1.43
TRIM59Q8IWR1 LINC00565-201ENST00000562710 2331 ntBASIC23.99■■□□□ 1.43
TRIM59Q8IWR1 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC23.99■■□□□ 1.43
TRIM59Q8IWR1 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
TRIM59Q8IWR1 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC23.99■■□□□ 1.43
TRIM59Q8IWR1 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
TRIM59Q8IWR1 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
TRIM59Q8IWR1 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
TRIM59Q8IWR1 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
TRIM59Q8IWR1 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
TRIM59Q8IWR1 AL356740.2-201ENST00000601559 647 ntBASIC23.99■■□□□ 1.43
TRIM59Q8IWR1 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC23.99■■□□□ 1.43
TRIM59Q8IWR1 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC23.99■■□□□ 1.43
TRIM59Q8IWR1 AC241377.3-202ENST00000626088 1088 ntBASIC23.99■■□□□ 1.43
TRIM59Q8IWR1 AC241585.3-202ENST00000628937 1088 ntBASIC23.99■■□□□ 1.43
TRIM59Q8IWR1 AC245100.8-202ENST00000629247 1058 ntBASIC23.99■■□□□ 1.43
TRIM59Q8IWR1 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
TRIM59Q8IWR1 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC23.99■■□□□ 1.43
TRIM59Q8IWR1 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC23.99■■□□□ 1.43
TRIM59Q8IWR1 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
TRIM59Q8IWR1 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
TRIM59Q8IWR1 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC23.98■■□□□ 1.43
TRIM59Q8IWR1 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC23.98■■□□□ 1.43
TRIM59Q8IWR1 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
TRIM59Q8IWR1 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
TRIM59Q8IWR1 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
TRIM59Q8IWR1 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC23.98■■□□□ 1.43
TRIM59Q8IWR1 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC23.98■■□□□ 1.43
TRIM59Q8IWR1 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC23.98■■□□□ 1.43
TRIM59Q8IWR1 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC23.98■■□□□ 1.43
TRIM59Q8IWR1 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
TRIM59Q8IWR1 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC23.98■■□□□ 1.43
TRIM59Q8IWR1 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms