Protein–RNA interactions for Protein: Q71DI3

HIST2H3A, Histone H3.2, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H3AQ71DI3 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HIST2H3AQ71DI3 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HIST2H3AQ71DI3 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HIST2H3AQ71DI3 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
HIST2H3AQ71DI3 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HIST2H3AQ71DI3 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HIST2H3AQ71DI3 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
HIST2H3AQ71DI3 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
HIST2H3AQ71DI3 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC19.34■□□□□ 0.69
HIST2H3AQ71DI3 AL356441.2-201ENST00000443009 864 ntBASIC19.34■□□□□ 0.69
HIST2H3AQ71DI3 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
HIST2H3AQ71DI3 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HIST2H3AQ71DI3 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC19.34■□□□□ 0.69
HIST2H3AQ71DI3 RASSF1-AS1-201ENST00000629828 790 ntBASIC19.34■□□□□ 0.69
HIST2H3AQ71DI3 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
HIST2H3AQ71DI3 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HIST2H3AQ71DI3 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HIST2H3AQ71DI3 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC19.34■□□□□ 0.69
HIST2H3AQ71DI3 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
HIST2H3AQ71DI3 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
HIST2H3AQ71DI3 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
HIST2H3AQ71DI3 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
HIST2H3AQ71DI3 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
HIST2H3AQ71DI3 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
HIST2H3AQ71DI3 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
HIST2H3AQ71DI3 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC19.33■□□□□ 0.68
HIST2H3AQ71DI3 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
HIST2H3AQ71DI3 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
HIST2H3AQ71DI3 GUSBP5-202ENST00000510805 1989 ntBASIC19.33■□□□□ 0.68
HIST2H3AQ71DI3 AC087742.1-201ENST00000575880 1738 ntBASIC19.33■□□□□ 0.68
HIST2H3AQ71DI3 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
HIST2H3AQ71DI3 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
HIST2H3AQ71DI3 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
HIST2H3AQ71DI3 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
HIST2H3AQ71DI3 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HIST2H3AQ71DI3 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
HIST2H3AQ71DI3 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HIST2H3AQ71DI3 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
HIST2H3AQ71DI3 GTSE1-AS1-202ENST00000623117 1518 ntBASIC19.32■□□□□ 0.68
HIST2H3AQ71DI3 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HIST2H3AQ71DI3 QDPR-206ENST00000508623 601 ntTSL 3 BASIC19.32■□□□□ 0.68
HIST2H3AQ71DI3 AL512631.2-201ENST00000604634 923 ntBASIC19.32■□□□□ 0.68
HIST2H3AQ71DI3 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HIST2H3AQ71DI3 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
HIST2H3AQ71DI3 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HIST2H3AQ71DI3 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
HIST2H3AQ71DI3 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC19.32■□□□□ 0.68
HIST2H3AQ71DI3 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
HIST2H3AQ71DI3 GATM-206ENST00000558336 1522 ntTSL 2 BASIC19.31■□□□□ 0.68
HIST2H3AQ71DI3 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HIST2H3AQ71DI3 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
HIST2H3AQ71DI3 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
HIST2H3AQ71DI3 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
HIST2H3AQ71DI3 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC19.31■□□□□ 0.68
HIST2H3AQ71DI3 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
HIST2H3AQ71DI3 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC19.31■□□□□ 0.68
HIST2H3AQ71DI3 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC19.31■□□□□ 0.68
HIST2H3AQ71DI3 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC19.31■□□□□ 0.68
HIST2H3AQ71DI3 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HIST2H3AQ71DI3 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC19.31■□□□□ 0.68
HIST2H3AQ71DI3 ECEL1P1-201ENST00000373592 1742 ntBASIC19.31■□□□□ 0.68
HIST2H3AQ71DI3 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HIST2H3AQ71DI3 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HIST2H3AQ71DI3 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HIST2H3AQ71DI3 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HIST2H3AQ71DI3 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
HIST2H3AQ71DI3 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
HIST2H3AQ71DI3 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
HIST2H3AQ71DI3 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC19.3■□□□□ 0.68
HIST2H3AQ71DI3 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC19.3■□□□□ 0.68
HIST2H3AQ71DI3 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
HIST2H3AQ71DI3 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
HIST2H3AQ71DI3 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
HIST2H3AQ71DI3 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HIST2H3AQ71DI3 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HIST2H3AQ71DI3 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HIST2H3AQ71DI3 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
HIST2H3AQ71DI3 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HIST2H3AQ71DI3 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
HIST2H3AQ71DI3 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
HIST2H3AQ71DI3 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HIST2H3AQ71DI3 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HIST2H3AQ71DI3 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HIST2H3AQ71DI3 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC19.29■□□□□ 0.68
HIST2H3AQ71DI3 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
HIST2H3AQ71DI3 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC19.29■□□□□ 0.68
HIST2H3AQ71DI3 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC19.29■□□□□ 0.68
HIST2H3AQ71DI3 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC19.29■□□□□ 0.68
HIST2H3AQ71DI3 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC19.29■□□□□ 0.68
HIST2H3AQ71DI3 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HIST2H3AQ71DI3 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC19.29■□□□□ 0.68
HIST2H3AQ71DI3 AC004687.1-201ENST00000579003 1625 ntBASIC19.29■□□□□ 0.68
HIST2H3AQ71DI3 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HIST2H3AQ71DI3 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HIST2H3AQ71DI3 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
HIST2H3AQ71DI3 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
HIST2H3AQ71DI3 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC19.28■□□□□ 0.68
HIST2H3AQ71DI3 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HIST2H3AQ71DI3 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC19.28■□□□□ 0.68
HIST2H3AQ71DI3 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms