Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC22.87■■□□□ 1.25
FOXR1Q6PIV2 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC22.87■■□□□ 1.25
FOXR1Q6PIV2 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
FOXR1Q6PIV2 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC22.86■■□□□ 1.25
FOXR1Q6PIV2 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
FOXR1Q6PIV2 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC22.86■■□□□ 1.25
FOXR1Q6PIV2 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC22.86■■□□□ 1.25
FOXR1Q6PIV2 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC22.86■■□□□ 1.25
FOXR1Q6PIV2 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC22.86■■□□□ 1.25
FOXR1Q6PIV2 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
FOXR1Q6PIV2 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC22.86■■□□□ 1.25
FOXR1Q6PIV2 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
FOXR1Q6PIV2 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC22.86■■□□□ 1.25
FOXR1Q6PIV2 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC22.86■■□□□ 1.25
FOXR1Q6PIV2 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
FOXR1Q6PIV2 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC22.86■■□□□ 1.25
FOXR1Q6PIV2 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
FOXR1Q6PIV2 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC22.85■■□□□ 1.25
FOXR1Q6PIV2 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
FOXR1Q6PIV2 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
FOXR1Q6PIV2 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC22.85■■□□□ 1.25
FOXR1Q6PIV2 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC22.85■■□□□ 1.25
FOXR1Q6PIV2 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC22.85■■□□□ 1.25
FOXR1Q6PIV2 RALB-208ENST00000631312 311 ntTSL 5 BASIC22.85■■□□□ 1.25
FOXR1Q6PIV2 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC22.85■■□□□ 1.25
FOXR1Q6PIV2 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC22.85■■□□□ 1.25
FOXR1Q6PIV2 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC22.85■■□□□ 1.25
FOXR1Q6PIV2 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
FOXR1Q6PIV2 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC22.85■■□□□ 1.25
FOXR1Q6PIV2 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC22.85■■□□□ 1.25
FOXR1Q6PIV2 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
FOXR1Q6PIV2 AC021242.3-201ENST00000607598 1377 ntBASIC22.85■■□□□ 1.25
FOXR1Q6PIV2 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC22.85■■□□□ 1.25
FOXR1Q6PIV2 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
FOXR1Q6PIV2 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
FOXR1Q6PIV2 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
FOXR1Q6PIV2 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
FOXR1Q6PIV2 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC22.85■■□□□ 1.25
FOXR1Q6PIV2 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
FOXR1Q6PIV2 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC22.84■■□□□ 1.25
FOXR1Q6PIV2 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
FOXR1Q6PIV2 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC22.84■■□□□ 1.25
FOXR1Q6PIV2 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
FOXR1Q6PIV2 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC22.84■■□□□ 1.25
FOXR1Q6PIV2 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
FOXR1Q6PIV2 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC22.84■■□□□ 1.25
FOXR1Q6PIV2 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC22.84■■□□□ 1.25
FOXR1Q6PIV2 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC22.84■■□□□ 1.25
FOXR1Q6PIV2 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC22.84■■□□□ 1.25
FOXR1Q6PIV2 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
FOXR1Q6PIV2 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
FOXR1Q6PIV2 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC22.83■■□□□ 1.25
FOXR1Q6PIV2 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
FOXR1Q6PIV2 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC22.83■■□□□ 1.25
FOXR1Q6PIV2 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC22.83■■□□□ 1.25
FOXR1Q6PIV2 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
FOXR1Q6PIV2 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC22.83■■□□□ 1.25
FOXR1Q6PIV2 SRR-208ENST00000576848 588 ntTSL 4 BASIC22.83■■□□□ 1.25
FOXR1Q6PIV2 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC22.83■■□□□ 1.25
FOXR1Q6PIV2 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
FOXR1Q6PIV2 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
FOXR1Q6PIV2 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC22.83■■□□□ 1.24
FOXR1Q6PIV2 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
FOXR1Q6PIV2 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC22.82■■□□□ 1.24
FOXR1Q6PIV2 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC22.82■■□□□ 1.24
FOXR1Q6PIV2 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
FOXR1Q6PIV2 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC22.82■■□□□ 1.24
FOXR1Q6PIV2 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
FOXR1Q6PIV2 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
FOXR1Q6PIV2 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
FOXR1Q6PIV2 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
FOXR1Q6PIV2 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
FOXR1Q6PIV2 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC22.82■■□□□ 1.24
FOXR1Q6PIV2 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC22.82■■□□□ 1.24
FOXR1Q6PIV2 BID-212ENST00000614949 1988 ntTSL 5 BASIC22.82■■□□□ 1.24
FOXR1Q6PIV2 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
FOXR1Q6PIV2 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
FOXR1Q6PIV2 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
FOXR1Q6PIV2 NALT1-201ENST00000429224 738 ntTSL 5 BASIC22.82■■□□□ 1.24
FOXR1Q6PIV2 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
FOXR1Q6PIV2 AC092028.1-203ENST00000608262 953 ntBASIC22.82■■□□□ 1.24
FOXR1Q6PIV2 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC22.82■■□□□ 1.24
FOXR1Q6PIV2 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
FOXR1Q6PIV2 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC22.82■■□□□ 1.24
FOXR1Q6PIV2 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
FOXR1Q6PIV2 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
FOXR1Q6PIV2 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC22.81■■□□□ 1.24
FOXR1Q6PIV2 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC22.81■■□□□ 1.24
FOXR1Q6PIV2 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
FOXR1Q6PIV2 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
FOXR1Q6PIV2 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC22.81■■□□□ 1.24
FOXR1Q6PIV2 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
FOXR1Q6PIV2 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
FOXR1Q6PIV2 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC22.8■■□□□ 1.24
FOXR1Q6PIV2 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
FOXR1Q6PIV2 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC22.8■■□□□ 1.24
FOXR1Q6PIV2 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
FOXR1Q6PIV2 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
FOXR1Q6PIV2 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
FOXR1Q6PIV2 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC22.8■■□□□ 1.24
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms