Protein–RNA interactions for Protein: Q15629

TRAM1, Translocating chain-associated membrane protein 1, humanhuman

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1Q15629 PALM-208ENST00000592155 2272 ntTSL 4 BASIC19.43■□□□□ 0.7
TRAM1Q15629 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRAM1Q15629 DUX4L9-201ENST00000449051 1259 ntBASIC19.43■□□□□ 0.7
TRAM1Q15629 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRAM1Q15629 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TRAM1Q15629 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
TRAM1Q15629 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC19.43■□□□□ 0.7
TRAM1Q15629 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC19.43■□□□□ 0.7
TRAM1Q15629 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TRAM1Q15629 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRAM1Q15629 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC19.42■□□□□ 0.7
TRAM1Q15629 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
TRAM1Q15629 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC19.42■□□□□ 0.7
TRAM1Q15629 AC004448.1-201ENST00000458332 883 ntBASIC19.42■□□□□ 0.7
TRAM1Q15629 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRAM1Q15629 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC19.42■□□□□ 0.7
TRAM1Q15629 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRAM1Q15629 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
TRAM1Q15629 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
TRAM1Q15629 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRAM1Q15629 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRAM1Q15629 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRAM1Q15629 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRAM1Q15629 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRAM1Q15629 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC19.41■□□□□ 0.7
TRAM1Q15629 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC19.41■□□□□ 0.7
TRAM1Q15629 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC19.41■□□□□ 0.7
TRAM1Q15629 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC19.41■□□□□ 0.7
TRAM1Q15629 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRAM1Q15629 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRAM1Q15629 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRAM1Q15629 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TRAM1Q15629 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC19.41■□□□□ 0.7
TRAM1Q15629 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TRAM1Q15629 AC010542.4-201ENST00000563151 1910 ntBASIC19.41■□□□□ 0.7
TRAM1Q15629 FAM99A-202ENST00000538190 1989 ntBASIC19.41■□□□□ 0.7
TRAM1Q15629 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRAM1Q15629 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC19.4■□□□□ 0.7
TRAM1Q15629 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRAM1Q15629 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC19.4■□□□□ 0.7
TRAM1Q15629 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRAM1Q15629 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC19.4■□□□□ 0.7
TRAM1Q15629 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TRAM1Q15629 HYI-210ENST00000486909 905 ntTSL 5 BASIC19.4■□□□□ 0.7
TRAM1Q15629 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TRAM1Q15629 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TRAM1Q15629 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRAM1Q15629 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRAM1Q15629 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
TRAM1Q15629 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC19.4■□□□□ 0.7
TRAM1Q15629 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRAM1Q15629 USF2-207ENST00000595068 1612 ntTSL 5 BASIC19.4■□□□□ 0.7
TRAM1Q15629 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
TRAM1Q15629 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC19.39■□□□□ 0.7
TRAM1Q15629 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
TRAM1Q15629 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC19.39■□□□□ 0.7
TRAM1Q15629 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRAM1Q15629 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC19.39■□□□□ 0.69
TRAM1Q15629 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRAM1Q15629 AC019171.1-201ENST00000601251 1056 ntBASIC19.39■□□□□ 0.69
TRAM1Q15629 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC19.39■□□□□ 0.69
TRAM1Q15629 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
TRAM1Q15629 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRAM1Q15629 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRAM1Q15629 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
TRAM1Q15629 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TRAM1Q15629 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRAM1Q15629 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC19.38■□□□□ 0.69
TRAM1Q15629 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC19.38■□□□□ 0.69
TRAM1Q15629 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TRAM1Q15629 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRAM1Q15629 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRAM1Q15629 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRAM1Q15629 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRAM1Q15629 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
TRAM1Q15629 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRAM1Q15629 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRAM1Q15629 RNF126P1-201ENST00000567452 1320 ntBASIC19.37■□□□□ 0.69
TRAM1Q15629 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
TRAM1Q15629 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRAM1Q15629 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRAM1Q15629 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRAM1Q15629 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRAM1Q15629 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRAM1Q15629 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRAM1Q15629 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC19.36■□□□□ 0.69
TRAM1Q15629 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRAM1Q15629 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRAM1Q15629 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC19.36■□□□□ 0.69
TRAM1Q15629 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRAM1Q15629 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRAM1Q15629 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC19.36■□□□□ 0.69
TRAM1Q15629 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC19.36■□□□□ 0.69
TRAM1Q15629 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TRAM1Q15629 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRAM1Q15629 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC19.36■□□□□ 0.69
TRAM1Q15629 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRAM1Q15629 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC19.36■□□□□ 0.69
TRAM1Q15629 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRAM1Q15629 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms