Protein–RNA interactions for Protein: P78334

GABRE, Gamma-aminobutyric acid receptor subunit epsilon, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABREP78334 AC104771.1-201ENST00000603335 964 ntBASIC21.08■□□□□ 0.97
GABREP78334 LINC01529-204ENST00000636474 1715 ntBASIC21.08■□□□□ 0.97
GABREP78334 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
GABREP78334 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC21.07■□□□□ 0.96
GABREP78334 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
GABREP78334 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
GABREP78334 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC21.07■□□□□ 0.96
GABREP78334 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
GABREP78334 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC21.07■□□□□ 0.96
GABREP78334 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
GABREP78334 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC21.07■□□□□ 0.96
GABREP78334 PPP1R14BP3-201ENST00000509033 445 ntBASIC21.07■□□□□ 0.96
GABREP78334 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC21.07■□□□□ 0.96
GABREP78334 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC21.07■□□□□ 0.96
GABREP78334 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
GABREP78334 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
GABREP78334 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
GABREP78334 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
GABREP78334 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
GABREP78334 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC21.06■□□□□ 0.96
GABREP78334 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
GABREP78334 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
GABREP78334 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
GABREP78334 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC21.06■□□□□ 0.96
GABREP78334 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
GABREP78334 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC21.06■□□□□ 0.96
GABREP78334 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC21.06■□□□□ 0.96
GABREP78334 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC21.06■□□□□ 0.96
GABREP78334 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC21.06■□□□□ 0.96
GABREP78334 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
GABREP78334 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC21.06■□□□□ 0.96
GABREP78334 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
GABREP78334 AC004854.2-201ENST00000608450 1441 ntBASIC21.05■□□□□ 0.96
GABREP78334 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
GABREP78334 AC144652.1-201ENST00000609974 1624 ntBASIC21.05■□□□□ 0.96
GABREP78334 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC21.05■□□□□ 0.96
GABREP78334 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
GABREP78334 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
GABREP78334 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC21.05■□□□□ 0.96
GABREP78334 AL355802.2-201ENST00000402069 882 ntBASIC21.05■□□□□ 0.96
GABREP78334 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC21.05■□□□□ 0.96
GABREP78334 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
GABREP78334 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC21.05■□□□□ 0.96
GABREP78334 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC21.05■□□□□ 0.96
GABREP78334 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC21.05■□□□□ 0.96
GABREP78334 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
GABREP78334 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
GABREP78334 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
GABREP78334 AP004607.4-201ENST00000530158 1459 ntBASIC21.05■□□□□ 0.96
GABREP78334 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
GABREP78334 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
GABREP78334 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
GABREP78334 AC135731.1-201ENST00000569415 2548 ntBASIC21.04■□□□□ 0.96
GABREP78334 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
GABREP78334 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC21.04■□□□□ 0.96
GABREP78334 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
GABREP78334 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
GABREP78334 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC21.04■□□□□ 0.96
GABREP78334 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
GABREP78334 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC21.04■□□□□ 0.96
GABREP78334 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
GABREP78334 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC21.04■□□□□ 0.96
GABREP78334 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
GABREP78334 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
GABREP78334 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
GABREP78334 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
GABREP78334 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
GABREP78334 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
GABREP78334 ABHD17AP1-201ENST00000358206 933 ntBASIC21.03■□□□□ 0.96
GABREP78334 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
GABREP78334 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
GABREP78334 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
GABREP78334 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC21.03■□□□□ 0.96
GABREP78334 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
GABREP78334 AL109923.1-201ENST00000618799 583 ntBASIC21.03■□□□□ 0.96
GABREP78334 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
GABREP78334 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
GABREP78334 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
GABREP78334 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
GABREP78334 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
GABREP78334 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
GABREP78334 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
GABREP78334 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
GABREP78334 MAP2K4P1-201ENST00000438453 1195 ntBASIC21.02■□□□□ 0.96
GABREP78334 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC21.02■□□□□ 0.96
GABREP78334 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC21.02■□□□□ 0.96
GABREP78334 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
GABREP78334 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
GABREP78334 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
GABREP78334 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.95
GABREP78334 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
GABREP78334 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
GABREP78334 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
GABREP78334 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
GABREP78334 KRT19P1-201ENST00000405746 1186 ntBASIC21.01■□□□□ 0.95
GABREP78334 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC21.01■□□□□ 0.95
GABREP78334 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC21.01■□□□□ 0.95
GABREP78334 WWOX-218ENST00000627394 894 ntTSL 5 BASIC21.01■□□□□ 0.95
GABREP78334 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
GABREP78334 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms