Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CLDN20P56880 AC009086.3-201ENST00000623486 1008 ntBASIC20.17■□□□□ 0.82
CLDN20P56880 RALB-208ENST00000631312 311 ntTSL 5 BASIC20.17■□□□□ 0.82
CLDN20P56880 H19-210ENST00000439725 1929 ntTSL 2 BASIC20.17■□□□□ 0.82
CLDN20P56880 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CLDN20P56880 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CLDN20P56880 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CLDN20P56880 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CLDN20P56880 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CLDN20P56880 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
CLDN20P56880 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.16■□□□□ 0.82
CLDN20P56880 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CLDN20P56880 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CLDN20P56880 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC20.16■□□□□ 0.82
CLDN20P56880 PBX2P1-201ENST00000493219 1291 ntBASIC20.16■□□□□ 0.82
CLDN20P56880 DUX4L19-201ENST00000557448 1267 ntBASIC20.16■□□□□ 0.82
CLDN20P56880 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CLDN20P56880 AL136162.1-201ENST00000607711 1078 ntBASIC20.16■□□□□ 0.82
CLDN20P56880 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
CLDN20P56880 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CLDN20P56880 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC20.15■□□□□ 0.82
CLDN20P56880 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CLDN20P56880 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CLDN20P56880 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC20.15■□□□□ 0.82
CLDN20P56880 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
CLDN20P56880 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC20.15■□□□□ 0.82
CLDN20P56880 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC20.15■□□□□ 0.82
CLDN20P56880 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CLDN20P56880 SERBP1P1-201ENST00000396021 1160 ntBASIC20.15■□□□□ 0.82
CLDN20P56880 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC20.15■□□□□ 0.82
CLDN20P56880 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CLDN20P56880 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
CLDN20P56880 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
CLDN20P56880 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CLDN20P56880 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CLDN20P56880 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CLDN20P56880 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CLDN20P56880 AC079630.1-202ENST00000618127 1840 ntBASIC20.15■□□□□ 0.82
CLDN20P56880 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CLDN20P56880 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CLDN20P56880 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
CLDN20P56880 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC20.15■□□□□ 0.82
CLDN20P56880 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
CLDN20P56880 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CLDN20P56880 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CLDN20P56880 AC144652.1-201ENST00000609974 1624 ntBASIC20.14■□□□□ 0.81
CLDN20P56880 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC20.14■□□□□ 0.81
CLDN20P56880 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CLDN20P56880 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CLDN20P56880 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC20.14■□□□□ 0.81
CLDN20P56880 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC20.14■□□□□ 0.81
CLDN20P56880 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
CLDN20P56880 PTCHD3P2-201ENST00000424937 1205 ntBASIC20.14■□□□□ 0.81
CLDN20P56880 AC024257.2-201ENST00000549699 147 ntBASIC20.14■□□□□ 0.81
CLDN20P56880 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
CLDN20P56880 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CLDN20P56880 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CLDN20P56880 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CLDN20P56880 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC20.14■□□□□ 0.81
CLDN20P56880 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CLDN20P56880 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
CLDN20P56880 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CLDN20P56880 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CLDN20P56880 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CLDN20P56880 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
CLDN20P56880 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
CLDN20P56880 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CLDN20P56880 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC20.13■□□□□ 0.81
CLDN20P56880 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
CLDN20P56880 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CLDN20P56880 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CLDN20P56880 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC20.13■□□□□ 0.81
CLDN20P56880 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC20.13■□□□□ 0.81
CLDN20P56880 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CLDN20P56880 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
CLDN20P56880 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CLDN20P56880 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CLDN20P56880 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CLDN20P56880 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
CLDN20P56880 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CLDN20P56880 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC20.12■□□□□ 0.81
CLDN20P56880 AC135279.3-201ENST00000610945 1311 ntBASIC20.12■□□□□ 0.81
CLDN20P56880 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CLDN20P56880 MIR638-201ENST00000385237 100 ntBASIC20.12■□□□□ 0.81
CLDN20P56880 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC20.12■□□□□ 0.81
CLDN20P56880 AC106739.1-201ENST00000617035 715 ntBASIC20.12■□□□□ 0.81
CLDN20P56880 C1orf229-201ENST00000623686 2258 ntBASIC20.12■□□□□ 0.81
CLDN20P56880 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC20.12■□□□□ 0.81
CLDN20P56880 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC20.12■□□□□ 0.81
CLDN20P56880 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CLDN20P56880 GTSE1-AS1-202ENST00000623117 1518 ntBASIC20.12■□□□□ 0.81
CLDN20P56880 AC137767.1-201ENST00000602918 1920 ntBASIC20.12■□□□□ 0.81
CLDN20P56880 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CLDN20P56880 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
CLDN20P56880 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC20.11■□□□□ 0.81
CLDN20P56880 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC20.11■□□□□ 0.81
CLDN20P56880 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC20.11■□□□□ 0.81
CLDN20P56880 MIR3181-201ENST00000578512 73 ntBASIC20.11■□□□□ 0.81
CLDN20P56880 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC20.11■□□□□ 0.81
CLDN20P56880 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC20.11■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms