Protein–RNA interactions for Protein: P56856

CLDN18, Claudin-18, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18P56856 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CLDN18P56856 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC19.77■□□□□ 0.76
CLDN18P56856 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CLDN18P56856 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
CLDN18P56856 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
CLDN18P56856 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
CLDN18P56856 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
CLDN18P56856 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC19.77■□□□□ 0.76
CLDN18P56856 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC19.77■□□□□ 0.76
CLDN18P56856 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC19.77■□□□□ 0.76
CLDN18P56856 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CLDN18P56856 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC19.77■□□□□ 0.76
CLDN18P56856 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
CLDN18P56856 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLDN18P56856 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC19.76■□□□□ 0.75
CLDN18P56856 DUSP8P3-201ENST00000399571 1760 ntBASIC19.76■□□□□ 0.75
CLDN18P56856 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLDN18P56856 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CLDN18P56856 RARRES2P6-201ENST00000567333 442 ntBASIC19.76■□□□□ 0.75
CLDN18P56856 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC19.76■□□□□ 0.75
CLDN18P56856 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC19.76■□□□□ 0.75
CLDN18P56856 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLDN18P56856 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLDN18P56856 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC19.76■□□□□ 0.75
CLDN18P56856 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
CLDN18P56856 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC19.76■□□□□ 0.75
CLDN18P56856 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
CLDN18P56856 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CLDN18P56856 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CLDN18P56856 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CLDN18P56856 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CLDN18P56856 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
CLDN18P56856 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CLDN18P56856 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC19.75■□□□□ 0.75
CLDN18P56856 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC19.75■□□□□ 0.75
CLDN18P56856 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC19.75■□□□□ 0.75
CLDN18P56856 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CLDN18P56856 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC19.75■□□□□ 0.75
CLDN18P56856 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
CLDN18P56856 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CLDN18P56856 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
CLDN18P56856 JTB-203ENST00000368589 1216 ntTSL 2 BASIC19.74■□□□□ 0.75
CLDN18P56856 MIR572-201ENST00000384983 95 ntBASIC19.74■□□□□ 0.75
CLDN18P56856 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CLDN18P56856 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC19.74■□□□□ 0.75
CLDN18P56856 AC026271.2-201ENST00000428091 497 ntBASIC19.74■□□□□ 0.75
CLDN18P56856 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC19.74■□□□□ 0.75
CLDN18P56856 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC19.74■□□□□ 0.75
CLDN18P56856 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CLDN18P56856 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CLDN18P56856 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CLDN18P56856 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CLDN18P56856 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CLDN18P56856 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
CLDN18P56856 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
CLDN18P56856 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CLDN18P56856 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CLDN18P56856 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CLDN18P56856 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CLDN18P56856 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
CLDN18P56856 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC19.73■□□□□ 0.75
CLDN18P56856 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
CLDN18P56856 AL031602.1-201ENST00000633169 911 ntBASIC19.73■□□□□ 0.75
CLDN18P56856 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CLDN18P56856 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC19.73■□□□□ 0.75
CLDN18P56856 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC19.73■□□□□ 0.75
CLDN18P56856 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC19.73■□□□□ 0.75
CLDN18P56856 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
CLDN18P56856 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC19.73■□□□□ 0.75
CLDN18P56856 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CLDN18P56856 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CLDN18P56856 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC19.72■□□□□ 0.75
CLDN18P56856 EI24-211ENST00000534546 1544 ntTSL 2 BASIC19.72■□□□□ 0.75
CLDN18P56856 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CLDN18P56856 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CLDN18P56856 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CLDN18P56856 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC19.72■□□□□ 0.75
CLDN18P56856 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC19.72■□□□□ 0.75
CLDN18P56856 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CLDN18P56856 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CLDN18P56856 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC19.72■□□□□ 0.75
CLDN18P56856 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CLDN18P56856 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC19.72■□□□□ 0.75
CLDN18P56856 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CLDN18P56856 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC19.72■□□□□ 0.75
CLDN18P56856 AC068587.7-201ENST00000641602 218 ntBASIC19.72■□□□□ 0.75
CLDN18P56856 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CLDN18P56856 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC19.72■□□□□ 0.75
CLDN18P56856 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CLDN18P56856 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
CLDN18P56856 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CLDN18P56856 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC19.71■□□□□ 0.75
CLDN18P56856 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLDN18P56856 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC19.71■□□□□ 0.75
CLDN18P56856 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLDN18P56856 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLDN18P56856 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CLDN18P56856 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC19.71■□□□□ 0.75
CLDN18P56856 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLDN18P56856 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms