Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CDH4P55283 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CDH4P55283 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC22.63■■□□□ 1.21
CDH4P55283 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC22.63■■□□□ 1.21
CDH4P55283 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC22.63■■□□□ 1.21
CDH4P55283 GRAMD4P2-201ENST00000423297 1097 ntBASIC22.63■■□□□ 1.21
CDH4P55283 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CDH4P55283 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
CDH4P55283 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
CDH4P55283 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC22.62■■□□□ 1.21
CDH4P55283 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC22.62■■□□□ 1.21
CDH4P55283 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CDH4P55283 AC105265.2-201ENST00000467189 838 ntBASIC22.62■■□□□ 1.21
CDH4P55283 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC22.62■■□□□ 1.21
CDH4P55283 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC22.62■■□□□ 1.21
CDH4P55283 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
CDH4P55283 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC22.61■■□□□ 1.21
CDH4P55283 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC22.61■■□□□ 1.21
CDH4P55283 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC22.61■■□□□ 1.21
CDH4P55283 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC22.61■■□□□ 1.21
CDH4P55283 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC22.61■■□□□ 1.21
CDH4P55283 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC22.61■■□□□ 1.21
CDH4P55283 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC22.61■■□□□ 1.21
CDH4P55283 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC22.61■■□□□ 1.21
CDH4P55283 AP005435.1-201ENST00000529293 1178 ntBASIC22.61■■□□□ 1.21
CDH4P55283 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
CDH4P55283 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC22.61■■□□□ 1.21
CDH4P55283 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
CDH4P55283 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
CDH4P55283 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC22.61■■□□□ 1.21
CDH4P55283 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC22.61■■□□□ 1.21
CDH4P55283 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
CDH4P55283 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
CDH4P55283 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC22.6■■□□□ 1.21
CDH4P55283 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
CDH4P55283 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC22.6■■□□□ 1.21
CDH4P55283 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
CDH4P55283 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC22.6■■□□□ 1.21
CDH4P55283 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC22.6■■□□□ 1.21
CDH4P55283 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC22.6■■□□□ 1.21
CDH4P55283 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
CDH4P55283 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC22.6■■□□□ 1.21
CDH4P55283 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
CDH4P55283 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC22.59■■□□□ 1.21
CDH4P55283 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC22.59■■□□□ 1.21
CDH4P55283 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC22.59■■□□□ 1.21
CDH4P55283 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC22.59■■□□□ 1.21
CDH4P55283 AICDA-202ENST00000537228 667 ntTSL 5 BASIC22.59■■□□□ 1.21
CDH4P55283 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC22.59■■□□□ 1.21
CDH4P55283 AC068587.7-201ENST00000641602 218 ntBASIC22.59■■□□□ 1.21
CDH4P55283 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC22.59■■□□□ 1.21
CDH4P55283 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
CDH4P55283 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC22.58■■□□□ 1.21
CDH4P55283 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
CDH4P55283 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC22.58■■□□□ 1.21
CDH4P55283 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
CDH4P55283 STOX2-205ENST00000513034 807 ntTSL 3 BASIC22.58■■□□□ 1.21
CDH4P55283 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
CDH4P55283 AL031602.1-201ENST00000633169 911 ntBASIC22.58■■□□□ 1.21
CDH4P55283 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
CDH4P55283 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CDH4P55283 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC22.57■■□□□ 1.2
CDH4P55283 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC22.57■■□□□ 1.2
CDH4P55283 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC22.57■■□□□ 1.2
CDH4P55283 ZNRF2P3-201ENST00000424200 374 ntBASIC22.57■■□□□ 1.2
CDH4P55283 RBM38-205ENST00000440234 686 ntTSL 2 BASIC22.57■■□□□ 1.2
CDH4P55283 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC22.57■■□□□ 1.2
CDH4P55283 IGHV3-19-201ENST00000521488 291 ntBASIC22.57■■□□□ 1.2
CDH4P55283 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC22.57■■□□□ 1.2
CDH4P55283 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
CDH4P55283 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC22.57■■□□□ 1.2
CDH4P55283 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CDH4P55283 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC22.57■■□□□ 1.2
CDH4P55283 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
CDH4P55283 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC22.57■■□□□ 1.2
CDH4P55283 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CDH4P55283 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC22.57■■□□□ 1.2
CDH4P55283 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CDH4P55283 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
CDH4P55283 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
CDH4P55283 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
CDH4P55283 EI24-211ENST00000534546 1544 ntTSL 2 BASIC22.56■■□□□ 1.2
CDH4P55283 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
CDH4P55283 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CDH4P55283 TSPY26P-201ENST00000476365 1326 ntBASIC22.56■■□□□ 1.2
CDH4P55283 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
CDH4P55283 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC22.55■■□□□ 1.2
CDH4P55283 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CDH4P55283 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
CDH4P55283 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC22.55■■□□□ 1.2
CDH4P55283 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC22.55■■□□□ 1.2
CDH4P55283 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
CDH4P55283 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC22.55■■□□□ 1.2
CDH4P55283 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
CDH4P55283 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CDH4P55283 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
CDH4P55283 GCA-201ENST00000233612 1694 ntTSL 2 BASIC22.55■■□□□ 1.2
CDH4P55283 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
CDH4P55283 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC22.55■■□□□ 1.2
CDH4P55283 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms