Protein–RNA interactions for Protein: P54860

UFD2, E4 ubiquitin-protein ligase UFD2, yeastyeast

Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UFD2P54860 CDC43YGL155W 1131 nt6.03□□□□□ -1.44
UFD2P54860 PUS6YGR169C 1215 nt6.03□□□□□ -1.44
UFD2P54860 YKL107WYKL107W 930 nt6.03□□□□□ -1.44
UFD2P54860 GAL7YBR018C 1101 nt6.03□□□□□ -1.44
UFD2P54860 YBR056W-AYBR056W-A 201 nt6.03□□□□□ -1.44
UFD2P54860 YAP1YML007W 1953 nt6.03□□□□□ -1.44
UFD2P54860 VTH1YIL173W 4650 nt6.03□□□□□ -1.44
UFD2P54860 VTH2YJL222W 4650 nt6.03□□□□□ -1.44
UFD2P54860 MSA1YOR066W 1890 nt6.02□□□□□ -1.44
UFD2P54860 FOB1YDR110W 1701 nt6.02□□□□□ -1.45
UFD2P54860 NPL4YBR170C 1743 nt6.02□□□□□ -1.45
UFD2P54860 YDR134CYDR134C 411 nt6.02□□□□□ -1.45
UFD2P54860 YPT32YGL210W 669 nt6.02□□□□□ -1.45
UFD2P54860 MRP51YPL118W 1035 nt6.02□□□□□ -1.45
UFD2P54860 CIN2YPL241C 807 nt6.02□□□□□ -1.45
UFD2P54860 YEL020CYEL020C 1683 nt6.01□□□□□ -1.45
UFD2P54860 QDR1YIL120W 1692 nt6.01□□□□□ -1.45
UFD2P54860 WTM2YOR229W 1404 nt6.01□□□□□ -1.45
UFD2P54860 PCS60YBR222C 1632 nt6.01□□□□□ -1.45
UFD2P54860 SNU23YDL098C 585 nt6.01□□□□□ -1.45
UFD2P54860 GLO2YDR272W 825 nt6.01□□□□□ -1.45
UFD2P54860 BI2Q0110 1272 nt6.01□□□□□ -1.45
UFD2P54860 UPS2YLR168C 693 nt6.01□□□□□ -1.45
UFD2P54860 YLR347W-AYLR347W-A 141 nt6.01□□□□□ -1.45
UFD2P54860 SEC14YMR079W 915 nt6.01□□□□□ -1.45
UFD2P54860 HOR7YMR251W-A 180 nt6.01□□□□□ -1.45
UFD2P54860 POR1YNL055C 852 nt6.01□□□□□ -1.45
UFD2P54860 YPR074W-AYPR074W-A 171 nt6.01□□□□□ -1.45
UFD2P54860 RET1YOR207C 3450 nt6.01□□□□□ -1.45
UFD2P54860 GSY2YLR258W 2118 nt6.01□□□□□ -1.45
UFD2P54860 TBF1YPL128C 1689 nt6.01□□□□□ -1.45
UFD2P54860 STE13YOR219C 2796 nt6□□□□□ -1.45
UFD2P54860 RUB1YDR139C 234 nt6□□□□□ -1.45
UFD2P54860 CWC21YDR482C 408 nt6□□□□□ -1.45
UFD2P54860 YHR175W-AYHR175W-A 150 nt6□□□□□ -1.45
UFD2P54860 BET1YIL004C 429 nt6□□□□□ -1.45
UFD2P54860 YKL223WYKL223W 333 nt6□□□□□ -1.45
UFD2P54860 SAM37YMR060C 984 nt6□□□□□ -1.45
UFD2P54860 YMR187CYMR187C 1296 nt6□□□□□ -1.45
UFD2P54860 YOR314WYOR314W 330 nt6□□□□□ -1.45
UFD2P54860 RMI1YPL024W 726 nt6□□□□□ -1.45
UFD2P54860 RSA1YPL193W 1146 nt6□□□□□ -1.45
UFD2P54860 DAS2YDR020C 699 nt5.99□□□□□ -1.45
UFD2P54860 YGL185CYGL185C 1140 nt5.99□□□□□ -1.45
UFD2P54860 YGR064WYGR064W 369 nt5.99□□□□□ -1.45
UFD2P54860 SRB5YGR104C 924 nt5.99□□□□□ -1.45
UFD2P54860 LNP1YHR192W 837 nt5.99□□□□□ -1.45
UFD2P54860 YIL077CYIL077C 963 nt5.99□□□□□ -1.45
UFD2P54860 APQ13YJL075C 417 nt5.99□□□□□ -1.45
UFD2P54860 DCC1YCL016C 1143 nt5.99□□□□□ -1.45
UFD2P54860 OCT1YKL134C 2319 nt5.99□□□□□ -1.45
UFD2P54860 GAL10YBR019C 2100 nt5.99□□□□□ -1.45
UFD2P54860 SMF1YOL122C 1728 nt5.99□□□□□ -1.45
UFD2P54860 URK1YNR012W 1506 nt5.99□□□□□ -1.45
UFD2P54860 SET5YHR207C 1581 nt5.98□□□□□ -1.45
UFD2P54860 POL31YJR006W 1464 nt5.98□□□□□ -1.45
UFD2P54860 ATG20YDL113C 1923 nt5.98□□□□□ -1.45
UFD2P54860 LDB19YOR322C 2457 nt5.98□□□□□ -1.45
UFD2P54860 RPL24AYGL031C 468 nt5.98□□□□□ -1.45
UFD2P54860 TYW3YGL050W 822 nt5.98□□□□□ -1.45
UFD2P54860 PDE1YGL248W 1110 nt5.98□□□□□ -1.45
UFD2P54860 SVP26YHR181W 687 nt5.98□□□□□ -1.45
UFD2P54860 MMF1YIL051C 438 nt5.98□□□□□ -1.45
UFD2P54860 SGT1YOR057W 1188 nt5.98□□□□□ -1.45
UFD2P54860 TRS20YBR254C 528 nt5.98□□□□□ -1.45
UFD2P54860 VPS38YLR360W 1320 nt5.98□□□□□ -1.45
UFD2P54860 RAT1YOR048C 3021 nt5.97□□□□□ -1.45
UFD2P54860 RPL13AYDL082W 600 nt5.97□□□□□ -1.45
UFD2P54860 YDR524W-CYDR524W-C 90 nt5.97□□□□□ -1.45
UFD2P54860 YGR016WYGR016W 573 nt5.97□□□□□ -1.45
UFD2P54860 COG2YGR120C 789 nt5.97□□□□□ -1.45
UFD2P54860 BUD19YJL188C 309 nt5.97□□□□□ -1.45
UFD2P54860 AUR1YKL004W 1206 nt5.97□□□□□ -1.45
UFD2P54860 MAP1YLR244C 1164 nt5.97□□□□□ -1.45
UFD2P54860 GMC2YLR445W 567 nt5.97□□□□□ -1.45
UFD2P54860 LEM3YNL323W 1245 nt5.97□□□□□ -1.45
UFD2P54860 MPP6YNR024W 561 nt5.97□□□□□ -1.45
UFD2P54860 ACC1YNR016C 6702 nt5.97□□□□□ -1.45
UFD2P54860 ERG4YGL012W 1422 nt5.97□□□□□ -1.45
UFD2P54860 YGL176CYGL176C 1665 nt5.97□□□□□ -1.45
UFD2P54860 TRP3YKL211C 1455 nt5.96□□□□□ -1.45
UFD2P54860 KIP2YPL155C 2121 nt5.96□□□□□ -1.45
UFD2P54860 HMLALPHA2YCL067C 633 nt5.96□□□□□ -1.46
UFD2P54860 MATALPHA2YCR039C 633 nt5.96□□□□□ -1.46
UFD2P54860 SHU2YDR078C 672 nt5.96□□□□□ -1.46
UFD2P54860 GVP36YIL041W 981 nt5.96□□□□□ -1.46
UFD2P54860 JLP1YLL057C 1239 nt5.96□□□□□ -1.46
UFD2P54860 ERG9YHR190W 1335 nt5.96□□□□□ -1.46
UFD2P54860 RCM1YNL022C 1473 nt5.96□□□□□ -1.46
UFD2P54860 AVT3YKL146W 2079 nt5.95□□□□□ -1.46
UFD2P54860 BCS1YDR375C 1371 nt5.95□□□□□ -1.46
UFD2P54860 TRE2YOR256C 2430 nt5.95□□□□□ -1.46
UFD2P54860 YCL076WYCL076W 744 nt5.95□□□□□ -1.46
UFD2P54860 RVS161YCR009C 798 nt5.95□□□□□ -1.46
UFD2P54860 YGR026WYGR026W 837 nt5.95□□□□□ -1.46
UFD2P54860 RIM101YHL027W 1878 nt5.95□□□□□ -1.46
UFD2P54860 GIC1YHR061C 945 nt5.95□□□□□ -1.46
UFD2P54860 YHR173CYHR173C 339 nt5.95□□□□□ -1.46
UFD2P54860 YJR157WYJR157W 363 nt5.95□□□□□ -1.46
UFD2P54860 APJ1YNL077W 1587 nt5.95□□□□□ -1.46
Retrieved 100 of 7,029 protein–RNA pairs in 15.1 ms