Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 GCSHP5-201ENST00000443090 522 ntBASIC22.23■■□□□ 1.15
NUBP1P53384 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC22.23■■□□□ 1.15
NUBP1P53384 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
NUBP1P53384 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC22.23■■□□□ 1.15
NUBP1P53384 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC22.23■■□□□ 1.15
NUBP1P53384 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
NUBP1P53384 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC22.23■■□□□ 1.15
NUBP1P53384 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
NUBP1P53384 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC22.22■■□□□ 1.15
NUBP1P53384 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC22.22■■□□□ 1.15
NUBP1P53384 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
NUBP1P53384 DUSP5P2-201ENST00000426873 1033 ntBASIC22.22■■□□□ 1.15
NUBP1P53384 RNA5SP413-201ENST00000516373 109 ntBASIC22.22■■□□□ 1.15
NUBP1P53384 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC22.22■■□□□ 1.15
NUBP1P53384 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC22.22■■□□□ 1.15
NUBP1P53384 AC105036.2-201ENST00000569468 176 ntBASIC22.22■■□□□ 1.15
NUBP1P53384 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC22.22■■□□□ 1.15
NUBP1P53384 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
NUBP1P53384 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
NUBP1P53384 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC22.21■■□□□ 1.15
NUBP1P53384 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
NUBP1P53384 RPS2P4-201ENST00000476944 856 ntBASIC22.21■■□□□ 1.15
NUBP1P53384 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC22.21■■□□□ 1.15
NUBP1P53384 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC22.21■■□□□ 1.15
NUBP1P53384 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC22.21■■□□□ 1.15
NUBP1P53384 SMUG1P1-201ENST00000590640 811 ntBASIC22.21■■□□□ 1.15
NUBP1P53384 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
NUBP1P53384 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC22.21■■□□□ 1.15
NUBP1P53384 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC22.21■■□□□ 1.15
NUBP1P53384 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC22.21■■□□□ 1.15
NUBP1P53384 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
NUBP1P53384 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC22.2■■□□□ 1.14
NUBP1P53384 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
NUBP1P53384 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
NUBP1P53384 PARP1-202ENST00000366792 553 ntTSL 3 BASIC22.2■■□□□ 1.14
NUBP1P53384 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC22.2■■□□□ 1.14
NUBP1P53384 AL596275.1-201ENST00000423464 877 ntBASIC22.2■■□□□ 1.14
NUBP1P53384 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC22.2■■□□□ 1.14
NUBP1P53384 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC22.2■■□□□ 1.14
NUBP1P53384 LINC00511-205ENST00000578206 908 ntTSL 3 BASIC22.2■■□□□ 1.14
NUBP1P53384 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
NUBP1P53384 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
NUBP1P53384 ERN1-208ENST00000606895 2068 ntBASIC22.19■■□□□ 1.14
NUBP1P53384 AC098590.1-201ENST00000468126 897 ntBASIC22.19■■□□□ 1.14
NUBP1P53384 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC22.19■■□□□ 1.14
NUBP1P53384 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
NUBP1P53384 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC22.19■■□□□ 1.14
NUBP1P53384 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC22.19■■□□□ 1.14
NUBP1P53384 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC22.18■■□□□ 1.14
NUBP1P53384 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC22.18■■□□□ 1.14
NUBP1P53384 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC22.18■■□□□ 1.14
NUBP1P53384 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC22.18■■□□□ 1.14
NUBP1P53384 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC22.18■■□□□ 1.14
NUBP1P53384 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC22.18■■□□□ 1.14
NUBP1P53384 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC22.18■■□□□ 1.14
NUBP1P53384 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
NUBP1P53384 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC22.18■■□□□ 1.14
NUBP1P53384 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC22.18■■□□□ 1.14
NUBP1P53384 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC22.18■■□□□ 1.14
NUBP1P53384 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
NUBP1P53384 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
NUBP1P53384 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
NUBP1P53384 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
NUBP1P53384 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC22.17■■□□□ 1.14
NUBP1P53384 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC22.17■■□□□ 1.14
NUBP1P53384 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC22.17■■□□□ 1.14
NUBP1P53384 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
NUBP1P53384 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC22.17■■□□□ 1.14
NUBP1P53384 RN7SL602P-201ENST00000578326 324 ntBASIC22.17■■□□□ 1.14
NUBP1P53384 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
NUBP1P53384 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
NUBP1P53384 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
NUBP1P53384 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
NUBP1P53384 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC22.16■■□□□ 1.14
NUBP1P53384 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC22.16■■□□□ 1.14
NUBP1P53384 AC098799.1-201ENST00000504752 800 ntBASIC22.16■■□□□ 1.14
NUBP1P53384 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC22.16■■□□□ 1.14
NUBP1P53384 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
NUBP1P53384 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
NUBP1P53384 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
NUBP1P53384 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
NUBP1P53384 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
NUBP1P53384 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC22.15■■□□□ 1.14
NUBP1P53384 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
NUBP1P53384 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC22.15■■□□□ 1.14
NUBP1P53384 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
NUBP1P53384 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC22.15■■□□□ 1.14
NUBP1P53384 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC22.15■■□□□ 1.14
NUBP1P53384 ADM-205ENST00000528544 586 ntTSL 2 BASIC22.15■■□□□ 1.14
NUBP1P53384 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC22.15■■□□□ 1.14
NUBP1P53384 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC22.15■■□□□ 1.14
NUBP1P53384 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC22.15■■□□□ 1.14
NUBP1P53384 MYCNOS-205ENST00000641950 531 ntBASIC22.15■■□□□ 1.14
NUBP1P53384 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
NUBP1P53384 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC22.15■■□□□ 1.14
NUBP1P53384 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC22.15■■□□□ 1.14
NUBP1P53384 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
NUBP1P53384 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC22.14■■□□□ 1.13
NUBP1P53384 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
NUBP1P53384 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC22.14■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms