Protein–RNA interactions for Protein: P51571

SSR4, Translocon-associated protein subunit delta, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4P51571 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SSR4P51571 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC20.27■□□□□ 0.84
SSR4P51571 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC20.27■□□□□ 0.84
SSR4P51571 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC20.27■□□□□ 0.84
SSR4P51571 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC20.27■□□□□ 0.84
SSR4P51571 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.83
SSR4P51571 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.83
SSR4P51571 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
SSR4P51571 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SSR4P51571 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC20.26■□□□□ 0.83
SSR4P51571 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
SSR4P51571 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SSR4P51571 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SSR4P51571 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
SSR4P51571 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC20.26■□□□□ 0.83
SSR4P51571 AC068587.7-201ENST00000641602 218 ntBASIC20.26■□□□□ 0.83
SSR4P51571 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SSR4P51571 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SSR4P51571 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC20.26■□□□□ 0.83
SSR4P51571 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
SSR4P51571 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SSR4P51571 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC20.26■□□□□ 0.83
SSR4P51571 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SSR4P51571 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
SSR4P51571 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC20.25■□□□□ 0.83
SSR4P51571 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SSR4P51571 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
SSR4P51571 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SSR4P51571 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC20.25■□□□□ 0.83
SSR4P51571 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC20.25■□□□□ 0.83
SSR4P51571 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SSR4P51571 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SSR4P51571 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SSR4P51571 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC20.25■□□□□ 0.83
SSR4P51571 NME4-202ENST00000382940 766 ntTSL 3 BASIC20.25■□□□□ 0.83
SSR4P51571 MIR572-201ENST00000384983 95 ntBASIC20.25■□□□□ 0.83
SSR4P51571 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC20.25■□□□□ 0.83
SSR4P51571 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC20.25■□□□□ 0.83
SSR4P51571 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SSR4P51571 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC20.25■□□□□ 0.83
SSR4P51571 NME4-211ENST00000620944 1193 ntTSL 2 BASIC20.25■□□□□ 0.83
SSR4P51571 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
SSR4P51571 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SSR4P51571 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SSR4P51571 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SSR4P51571 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
SSR4P51571 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SSR4P51571 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SSR4P51571 JTB-203ENST00000368589 1216 ntTSL 2 BASIC20.24■□□□□ 0.83
SSR4P51571 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SSR4P51571 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SSR4P51571 AC087239.1-201ENST00000622671 572 ntBASIC20.24■□□□□ 0.83
SSR4P51571 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
SSR4P51571 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC20.24■□□□□ 0.83
SSR4P51571 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
SSR4P51571 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC20.24■□□□□ 0.83
SSR4P51571 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SSR4P51571 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SSR4P51571 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SSR4P51571 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SSR4P51571 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SSR4P51571 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC20.23■□□□□ 0.83
SSR4P51571 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SSR4P51571 AK1-201ENST00000223836 736 ntTSL 3 BASIC20.23■□□□□ 0.83
SSR4P51571 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SSR4P51571 AC026271.2-201ENST00000428091 497 ntBASIC20.23■□□□□ 0.83
SSR4P51571 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC20.23■□□□□ 0.83
SSR4P51571 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC20.23■□□□□ 0.83
SSR4P51571 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC20.23■□□□□ 0.83
SSR4P51571 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC20.23■□□□□ 0.83
SSR4P51571 AL358852.1-201ENST00000623174 1268 ntBASIC20.23■□□□□ 0.83
SSR4P51571 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC20.23■□□□□ 0.83
SSR4P51571 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SSR4P51571 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC20.23■□□□□ 0.83
SSR4P51571 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC20.23■□□□□ 0.83
SSR4P51571 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
SSR4P51571 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SSR4P51571 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC20.22■□□□□ 0.83
SSR4P51571 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SSR4P51571 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
SSR4P51571 LHPP-203ENST00000392757 840 ntTSL 3 BASIC20.22■□□□□ 0.83
SSR4P51571 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SSR4P51571 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SSR4P51571 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC20.22■□□□□ 0.83
SSR4P51571 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
SSR4P51571 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
SSR4P51571 EI24-211ENST00000534546 1544 ntTSL 2 BASIC20.22■□□□□ 0.83
SSR4P51571 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC20.21■□□□□ 0.83
SSR4P51571 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SSR4P51571 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SSR4P51571 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SSR4P51571 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC20.21■□□□□ 0.83
SSR4P51571 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SSR4P51571 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC20.21■□□□□ 0.83
SSR4P51571 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC20.21■□□□□ 0.83
SSR4P51571 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
SSR4P51571 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
SSR4P51571 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
SSR4P51571 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SSR4P51571 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 11 ms