Protein–RNA interactions for Protein: P49674

CSNK1E, Casein kinase I isoform epsilon, humanhuman

Known RBP Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1EP49674 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CSNK1EP49674 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC21.8■■□□□ 1.08
CSNK1EP49674 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC21.8■■□□□ 1.08
CSNK1EP49674 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC21.8■■□□□ 1.08
CSNK1EP49674 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC21.8■■□□□ 1.08
CSNK1EP49674 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
CSNK1EP49674 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CSNK1EP49674 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CSNK1EP49674 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
CSNK1EP49674 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC21.79■■□□□ 1.08
CSNK1EP49674 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC21.79■■□□□ 1.08
CSNK1EP49674 GALNS-213ENST00000569433 723 ntTSL 3 BASIC21.79■■□□□ 1.08
CSNK1EP49674 AC080038.1-201ENST00000611274 1154 ntBASIC21.79■■□□□ 1.08
CSNK1EP49674 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CSNK1EP49674 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CSNK1EP49674 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CSNK1EP49674 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CSNK1EP49674 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC21.78■■□□□ 1.08
CSNK1EP49674 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CSNK1EP49674 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC21.78■■□□□ 1.08
CSNK1EP49674 EED-207ENST00000528180 1745 ntTSL 5 BASIC21.78■■□□□ 1.08
CSNK1EP49674 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CSNK1EP49674 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CSNK1EP49674 AC016769.1-201ENST00000409132 1010 ntBASIC21.78■■□□□ 1.08
CSNK1EP49674 HLA-L-209ENST00000420110 1011 ntBASIC21.78■■□□□ 1.08
CSNK1EP49674 DENND3-207ENST00000518347 850 ntTSL 2 BASIC21.78■■□□□ 1.08
CSNK1EP49674 AC137761.2-201ENST00000561729 223 ntBASIC21.78■■□□□ 1.08
CSNK1EP49674 AC145350.3-201ENST00000569033 163 ntBASIC21.78■■□□□ 1.08
CSNK1EP49674 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC21.78■■□□□ 1.08
CSNK1EP49674 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC21.78■■□□□ 1.08
CSNK1EP49674 TPRG1LP1-201ENST00000598702 760 ntBASIC21.78■■□□□ 1.08
CSNK1EP49674 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC21.78■■□□□ 1.08
CSNK1EP49674 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CSNK1EP49674 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CSNK1EP49674 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CSNK1EP49674 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CSNK1EP49674 AC004687.1-201ENST00000579003 1625 ntBASIC21.77■■□□□ 1.08
CSNK1EP49674 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CSNK1EP49674 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC21.77■■□□□ 1.08
CSNK1EP49674 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CSNK1EP49674 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC21.77■■□□□ 1.08
CSNK1EP49674 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
CSNK1EP49674 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC21.77■■□□□ 1.08
CSNK1EP49674 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CSNK1EP49674 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
CSNK1EP49674 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
CSNK1EP49674 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CSNK1EP49674 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC21.76■■□□□ 1.07
CSNK1EP49674 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
CSNK1EP49674 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC21.76■■□□□ 1.07
CSNK1EP49674 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CSNK1EP49674 COX20-201ENST00000366528 568 ntTSL 2 BASIC21.76■■□□□ 1.07
CSNK1EP49674 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC21.76■■□□□ 1.07
CSNK1EP49674 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CSNK1EP49674 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
CSNK1EP49674 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CSNK1EP49674 AC006015.1-201ENST00000429970 570 ntBASIC21.76■■□□□ 1.07
CSNK1EP49674 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC21.76■■□□□ 1.07
CSNK1EP49674 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CSNK1EP49674 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC21.76■■□□□ 1.07
CSNK1EP49674 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC21.76■■□□□ 1.07
CSNK1EP49674 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC21.76■■□□□ 1.07
CSNK1EP49674 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CSNK1EP49674 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CSNK1EP49674 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CSNK1EP49674 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC21.75■■□□□ 1.07
CSNK1EP49674 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC21.75■■□□□ 1.07
CSNK1EP49674 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC21.75■■□□□ 1.07
CSNK1EP49674 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC21.75■■□□□ 1.07
CSNK1EP49674 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC21.75■■□□□ 1.07
CSNK1EP49674 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CSNK1EP49674 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
CSNK1EP49674 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC21.75■■□□□ 1.07
CSNK1EP49674 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
CSNK1EP49674 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC21.75■■□□□ 1.07
CSNK1EP49674 SHD-204ENST00000599689 1729 ntTSL 5 BASIC21.75■■□□□ 1.07
CSNK1EP49674 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CSNK1EP49674 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CSNK1EP49674 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC21.74■■□□□ 1.07
CSNK1EP49674 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CSNK1EP49674 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
CSNK1EP49674 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CSNK1EP49674 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC21.74■■□□□ 1.07
CSNK1EP49674 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CSNK1EP49674 TK2-208ENST00000545043 1120 ntTSL 2 BASIC21.74■■□□□ 1.07
CSNK1EP49674 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC21.74■■□□□ 1.07
CSNK1EP49674 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC21.74■■□□□ 1.07
CSNK1EP49674 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
CSNK1EP49674 AC079630.1-202ENST00000618127 1840 ntBASIC21.73■■□□□ 1.07
CSNK1EP49674 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
CSNK1EP49674 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CSNK1EP49674 STX7-201ENST00000367937 1090 ntTSL 5 BASIC21.73■■□□□ 1.07
CSNK1EP49674 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC21.73■■□□□ 1.07
CSNK1EP49674 DBI-210ENST00000542275 757 ntTSL 5 BASIC21.73■■□□□ 1.07
CSNK1EP49674 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC21.73■■□□□ 1.07
CSNK1EP49674 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC21.73■■□□□ 1.07
CSNK1EP49674 BX005040.4-201ENST00000637145 1518 ntBASIC21.73■■□□□ 1.07
CSNK1EP49674 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CSNK1EP49674 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CSNK1EP49674 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms