Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SRP9P49458 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SRP9P49458 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC19.47■□□□□ 0.71
SRP9P49458 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC19.47■□□□□ 0.71
SRP9P49458 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC19.47■□□□□ 0.71
SRP9P49458 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SRP9P49458 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
SRP9P49458 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SRP9P49458 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SRP9P49458 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SRP9P49458 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC19.46■□□□□ 0.71
SRP9P49458 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC19.46■□□□□ 0.71
SRP9P49458 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
SRP9P49458 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC19.46■□□□□ 0.71
SRP9P49458 MIR6722-201ENST00000617286 78 ntBASIC19.46■□□□□ 0.71
SRP9P49458 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC19.46■□□□□ 0.71
SRP9P49458 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SRP9P49458 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC19.46■□□□□ 0.71
SRP9P49458 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC19.46■□□□□ 0.71
SRP9P49458 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SRP9P49458 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC19.45■□□□□ 0.7
SRP9P49458 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
SRP9P49458 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SRP9P49458 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC19.45■□□□□ 0.7
SRP9P49458 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC19.45■□□□□ 0.7
SRP9P49458 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC19.45■□□□□ 0.7
SRP9P49458 AC010997.5-201ENST00000609182 354 ntBASIC19.45■□□□□ 0.7
SRP9P49458 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
SRP9P49458 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SRP9P49458 EI24-213ENST00000618552 1747 ntTSL 5 BASIC19.45■□□□□ 0.7
SRP9P49458 H19-210ENST00000439725 1929 ntTSL 2 BASIC19.45■□□□□ 0.7
SRP9P49458 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SRP9P49458 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SRP9P49458 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SRP9P49458 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
SRP9P49458 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC19.44■□□□□ 0.7
SRP9P49458 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC19.44■□□□□ 0.7
SRP9P49458 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
SRP9P49458 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SRP9P49458 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
SRP9P49458 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
SRP9P49458 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
SRP9P49458 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SRP9P49458 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC19.44■□□□□ 0.7
SRP9P49458 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
SRP9P49458 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SRP9P49458 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SRP9P49458 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
SRP9P49458 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC19.43■□□□□ 0.7
SRP9P49458 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SRP9P49458 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
SRP9P49458 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SRP9P49458 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC19.43■□□□□ 0.7
SRP9P49458 KRT16P3-201ENST00000439127 1283 ntBASIC19.43■□□□□ 0.7
SRP9P49458 UNC93B8-201ENST00000511903 705 ntBASIC19.43■□□□□ 0.7
SRP9P49458 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
SRP9P49458 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC19.43■□□□□ 0.7
SRP9P49458 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SRP9P49458 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
SRP9P49458 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SRP9P49458 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SRP9P49458 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SRP9P49458 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC19.42■□□□□ 0.7
SRP9P49458 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC19.42■□□□□ 0.7
SRP9P49458 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SRP9P49458 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SRP9P49458 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SRP9P49458 EXOG-217ENST00000630638 197 ntTSL 5 BASIC19.42■□□□□ 0.7
SRP9P49458 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC19.42■□□□□ 0.7
SRP9P49458 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
SRP9P49458 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SRP9P49458 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SRP9P49458 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC19.42■□□□□ 0.7
SRP9P49458 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC19.41■□□□□ 0.7
SRP9P49458 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SRP9P49458 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC19.41■□□□□ 0.7
SRP9P49458 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC19.41■□□□□ 0.7
SRP9P49458 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC19.41■□□□□ 0.7
SRP9P49458 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
SRP9P49458 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SRP9P49458 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC19.41■□□□□ 0.7
SRP9P49458 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC19.41■□□□□ 0.7
SRP9P49458 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
SRP9P49458 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SRP9P49458 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC19.41■□□□□ 0.7
SRP9P49458 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SRP9P49458 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
SRP9P49458 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SRP9P49458 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
SRP9P49458 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
SRP9P49458 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC19.4■□□□□ 0.7
SRP9P49458 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC19.4■□□□□ 0.7
SRP9P49458 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
SRP9P49458 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SRP9P49458 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SRP9P49458 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC19.4■□□□□ 0.7
SRP9P49458 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC19.4■□□□□ 0.7
SRP9P49458 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SRP9P49458 REST-206ENST00000612429 1376 ntTSL 5 BASIC19.4■□□□□ 0.7
SRP9P49458 REST-207ENST00000616975 1370 ntTSL 5 BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms