Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
MMP13P45452 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC22.92■■□□□ 1.26
MMP13P45452 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC22.92■■□□□ 1.26
MMP13P45452 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
MMP13P45452 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC22.92■■□□□ 1.26
MMP13P45452 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC22.92■■□□□ 1.26
MMP13P45452 AC009102.2-201ENST00000606772 1639 ntBASIC22.92■■□□□ 1.26
MMP13P45452 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
MMP13P45452 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC22.92■■□□□ 1.26
MMP13P45452 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC22.92■■□□□ 1.26
MMP13P45452 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC22.92■■□□□ 1.26
MMP13P45452 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC22.92■■□□□ 1.26
MMP13P45452 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
MMP13P45452 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
MMP13P45452 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
MMP13P45452 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
MMP13P45452 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC22.91■■□□□ 1.26
MMP13P45452 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC22.91■■□□□ 1.26
MMP13P45452 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
MMP13P45452 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
MMP13P45452 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC22.91■■□□□ 1.26
MMP13P45452 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
MMP13P45452 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC22.9■■□□□ 1.26
MMP13P45452 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC22.9■■□□□ 1.26
MMP13P45452 AC242852.2-201ENST00000615738 1807 ntBASIC22.9■■□□□ 1.26
MMP13P45452 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC22.9■■□□□ 1.26
MMP13P45452 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
MMP13P45452 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC22.9■■□□□ 1.26
MMP13P45452 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
MMP13P45452 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC22.9■■□□□ 1.26
MMP13P45452 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC22.9■■□□□ 1.26
MMP13P45452 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
MMP13P45452 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
MMP13P45452 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC22.89■■□□□ 1.25
MMP13P45452 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
MMP13P45452 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC22.89■■□□□ 1.25
MMP13P45452 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
MMP13P45452 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
MMP13P45452 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
MMP13P45452 GCA-201ENST00000233612 1694 ntTSL 2 BASIC22.88■■□□□ 1.25
MMP13P45452 COMT-203ENST00000403184 2217 ntTSL 2 BASIC22.88■■□□□ 1.25
MMP13P45452 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
MMP13P45452 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
MMP13P45452 AC079630.1-202ENST00000618127 1840 ntBASIC22.88■■□□□ 1.25
MMP13P45452 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
MMP13P45452 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
MMP13P45452 SRR-208ENST00000576848 588 ntTSL 4 BASIC22.88■■□□□ 1.25
MMP13P45452 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC22.88■■□□□ 1.25
MMP13P45452 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
MMP13P45452 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC22.88■■□□□ 1.25
MMP13P45452 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
MMP13P45452 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC22.88■■□□□ 1.25
MMP13P45452 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC22.88■■□□□ 1.25
MMP13P45452 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC22.87■■□□□ 1.25
MMP13P45452 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC22.87■■□□□ 1.25
MMP13P45452 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC22.87■■□□□ 1.25
MMP13P45452 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
MMP13P45452 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC22.87■■□□□ 1.25
MMP13P45452 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
MMP13P45452 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
MMP13P45452 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC22.87■■□□□ 1.25
MMP13P45452 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC22.87■■□□□ 1.25
MMP13P45452 AC131212.1-201ENST00000613771 668 ntBASIC22.87■■□□□ 1.25
MMP13P45452 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC22.87■■□□□ 1.25
MMP13P45452 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC22.87■■□□□ 1.25
MMP13P45452 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
MMP13P45452 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC22.87■■□□□ 1.25
MMP13P45452 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC22.87■■□□□ 1.25
MMP13P45452 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC22.87■■□□□ 1.25
MMP13P45452 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
MMP13P45452 MYB-221ENST00000527615 2381 ntTSL 5 BASIC22.86■■□□□ 1.25
MMP13P45452 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC22.86■■□□□ 1.25
MMP13P45452 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC22.86■■□□□ 1.25
MMP13P45452 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC22.86■■□□□ 1.25
MMP13P45452 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC22.86■■□□□ 1.25
MMP13P45452 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
MMP13P45452 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
MMP13P45452 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC22.86■■□□□ 1.25
MMP13P45452 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
MMP13P45452 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC22.86■■□□□ 1.25
MMP13P45452 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC22.86■■□□□ 1.25
MMP13P45452 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
MMP13P45452 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
MMP13P45452 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC22.86■■□□□ 1.25
MMP13P45452 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
MMP13P45452 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
MMP13P45452 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC22.85■■□□□ 1.25
MMP13P45452 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
MMP13P45452 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC22.85■■□□□ 1.25
MMP13P45452 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC22.85■■□□□ 1.25
MMP13P45452 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
MMP13P45452 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC22.85■■□□□ 1.25
MMP13P45452 RPP21-222ENST00000433076 577 ntTSL 2 BASIC22.85■■□□□ 1.25
MMP13P45452 TRIR-202ENST00000588213 841 ntTSL 3 BASIC22.85■■□□□ 1.25
MMP13P45452 RASSF1-AS1-201ENST00000629828 790 ntBASIC22.85■■□□□ 1.25
MMP13P45452 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC22.85■■□□□ 1.25
MMP13P45452 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC22.85■■□□□ 1.25
MMP13P45452 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
MMP13P45452 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
MMP13P45452 AL137060.1-201ENST00000618151 2648 ntBASIC22.84■■□□□ 1.25
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms