Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
RFC3P40938 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RFC3P40938 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC20.18■□□□□ 0.82
RFC3P40938 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RFC3P40938 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
RFC3P40938 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RFC3P40938 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
RFC3P40938 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC20.17■□□□□ 0.82
RFC3P40938 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RFC3P40938 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RFC3P40938 NME4-202ENST00000382940 766 ntTSL 3 BASIC20.17■□□□□ 0.82
RFC3P40938 NME4-211ENST00000620944 1193 ntTSL 2 BASIC20.17■□□□□ 0.82
RFC3P40938 MIR6084-201ENST00000622012 110 ntBASIC20.17■□□□□ 0.82
RFC3P40938 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RFC3P40938 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC20.17■□□□□ 0.82
RFC3P40938 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RFC3P40938 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC20.17■□□□□ 0.82
RFC3P40938 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC20.17■□□□□ 0.82
RFC3P40938 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RFC3P40938 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
RFC3P40938 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
RFC3P40938 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC20.16■□□□□ 0.82
RFC3P40938 AL353803.4-201ENST00000565882 1934 ntBASIC20.16■□□□□ 0.82
RFC3P40938 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RFC3P40938 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
RFC3P40938 OR2I1P-207ENST00000453522 948 ntBASIC20.16■□□□□ 0.82
RFC3P40938 AICDA-202ENST00000537228 667 ntTSL 5 BASIC20.16■□□□□ 0.82
RFC3P40938 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC20.16■□□□□ 0.82
RFC3P40938 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RFC3P40938 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RFC3P40938 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC20.16■□□□□ 0.82
RFC3P40938 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
RFC3P40938 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
RFC3P40938 AC004687.1-201ENST00000579003 1625 ntBASIC20.16■□□□□ 0.82
RFC3P40938 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC20.16■□□□□ 0.82
RFC3P40938 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
RFC3P40938 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC20.16■□□□□ 0.82
RFC3P40938 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RFC3P40938 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
RFC3P40938 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC20.15■□□□□ 0.82
RFC3P40938 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC20.15■□□□□ 0.82
RFC3P40938 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RFC3P40938 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC20.15■□□□□ 0.82
RFC3P40938 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC20.15■□□□□ 0.82
RFC3P40938 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC20.15■□□□□ 0.82
RFC3P40938 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
RFC3P40938 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
RFC3P40938 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RFC3P40938 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC20.15■□□□□ 0.82
RFC3P40938 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RFC3P40938 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RFC3P40938 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC20.15■□□□□ 0.82
RFC3P40938 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RFC3P40938 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.82
RFC3P40938 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
RFC3P40938 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC20.14■□□□□ 0.81
RFC3P40938 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
RFC3P40938 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
RFC3P40938 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC20.14■□□□□ 0.81
RFC3P40938 AL162430.1-201ENST00000480705 870 ntBASIC20.14■□□□□ 0.81
RFC3P40938 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC20.14■□□□□ 0.81
RFC3P40938 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC20.14■□□□□ 0.81
RFC3P40938 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
RFC3P40938 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
RFC3P40938 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
RFC3P40938 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RFC3P40938 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RFC3P40938 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC20.13■□□□□ 0.81
RFC3P40938 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC20.13■□□□□ 0.81
RFC3P40938 AC104564.3-201ENST00000582367 638 ntBASIC20.13■□□□□ 0.81
RFC3P40938 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC20.13■□□□□ 0.81
RFC3P40938 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
RFC3P40938 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC20.13■□□□□ 0.81
RFC3P40938 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
RFC3P40938 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC20.13■□□□□ 0.81
RFC3P40938 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RFC3P40938 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC20.13■□□□□ 0.81
RFC3P40938 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RFC3P40938 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC20.12■□□□□ 0.81
RFC3P40938 AK1-201ENST00000223836 736 ntTSL 3 BASIC20.12■□□□□ 0.81
RFC3P40938 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RFC3P40938 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RFC3P40938 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
RFC3P40938 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
RFC3P40938 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC20.12■□□□□ 0.81
RFC3P40938 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC20.12■□□□□ 0.81
RFC3P40938 AL031602.1-201ENST00000633169 911 ntBASIC20.12■□□□□ 0.81
RFC3P40938 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
RFC3P40938 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
RFC3P40938 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RFC3P40938 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RFC3P40938 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RFC3P40938 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
RFC3P40938 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC20.11■□□□□ 0.81
RFC3P40938 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
RFC3P40938 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
RFC3P40938 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
RFC3P40938 PARL-206ENST00000435888 1098 ntTSL 5 BASIC20.11■□□□□ 0.81
RFC3P40938 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
RFC3P40938 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC20.11■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms