Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
GDF1P27539 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
GDF1P27539 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC20.01■□□□□ 0.79
GDF1P27539 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC20.01■□□□□ 0.79
GDF1P27539 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC20.01■□□□□ 0.79
GDF1P27539 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC20.01■□□□□ 0.79
GDF1P27539 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC20.01■□□□□ 0.79
GDF1P27539 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
GDF1P27539 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
GDF1P27539 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
GDF1P27539 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
GDF1P27539 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC20■□□□□ 0.79
GDF1P27539 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC20■□□□□ 0.79
GDF1P27539 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
GDF1P27539 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC20■□□□□ 0.79
GDF1P27539 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
GDF1P27539 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
GDF1P27539 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
GDF1P27539 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC19.99■□□□□ 0.79
GDF1P27539 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC19.99■□□□□ 0.79
GDF1P27539 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
GDF1P27539 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
GDF1P27539 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC19.99■□□□□ 0.79
GDF1P27539 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
GDF1P27539 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
GDF1P27539 AP005435.1-201ENST00000529293 1178 ntBASIC19.99■□□□□ 0.79
GDF1P27539 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
GDF1P27539 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
GDF1P27539 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC19.99■□□□□ 0.79
GDF1P27539 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
GDF1P27539 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
GDF1P27539 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
GDF1P27539 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
GDF1P27539 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
GDF1P27539 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC19.99■□□□□ 0.79
GDF1P27539 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
GDF1P27539 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC19.98■□□□□ 0.79
GDF1P27539 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
GDF1P27539 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
GDF1P27539 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
GDF1P27539 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
GDF1P27539 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC19.98■□□□□ 0.79
GDF1P27539 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
GDF1P27539 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
GDF1P27539 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC19.98■□□□□ 0.79
GDF1P27539 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
GDF1P27539 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC19.98■□□□□ 0.79
GDF1P27539 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
GDF1P27539 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC19.97■□□□□ 0.79
GDF1P27539 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
GDF1P27539 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
GDF1P27539 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
GDF1P27539 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC19.97■□□□□ 0.79
GDF1P27539 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
GDF1P27539 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
GDF1P27539 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC19.97■□□□□ 0.79
GDF1P27539 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
GDF1P27539 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC19.97■□□□□ 0.79
GDF1P27539 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
GDF1P27539 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC19.97■□□□□ 0.79
GDF1P27539 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
GDF1P27539 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
GDF1P27539 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
GDF1P27539 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
GDF1P27539 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
GDF1P27539 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
GDF1P27539 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
GDF1P27539 NME4-202ENST00000382940 766 ntTSL 3 BASIC19.96■□□□□ 0.79
GDF1P27539 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC19.96■□□□□ 0.79
GDF1P27539 NME4-211ENST00000620944 1193 ntTSL 2 BASIC19.96■□□□□ 0.79
GDF1P27539 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
GDF1P27539 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
GDF1P27539 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC19.96■□□□□ 0.79
GDF1P27539 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
GDF1P27539 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
GDF1P27539 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
GDF1P27539 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
GDF1P27539 JTB-203ENST00000368589 1216 ntTSL 2 BASIC19.95■□□□□ 0.78
GDF1P27539 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC19.95■□□□□ 0.78
GDF1P27539 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC19.95■□□□□ 0.78
GDF1P27539 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC19.95■□□□□ 0.78
GDF1P27539 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
GDF1P27539 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
GDF1P27539 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
GDF1P27539 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
GDF1P27539 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC19.95■□□□□ 0.78
GDF1P27539 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
GDF1P27539 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
GDF1P27539 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC19.94■□□□□ 0.78
GDF1P27539 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
GDF1P27539 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
GDF1P27539 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
GDF1P27539 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
GDF1P27539 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
GDF1P27539 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
GDF1P27539 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
GDF1P27539 MIR572-201ENST00000384983 95 ntBASIC19.94■□□□□ 0.78
GDF1P27539 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC19.94■□□□□ 0.78
GDF1P27539 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
GDF1P27539 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC19.94■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms