Protein–RNA interactions for Protein: P08253

MMP2, 72 kDa type IV collagenase, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP2P08253 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
MMP2P08253 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
MMP2P08253 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
MMP2P08253 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
MMP2P08253 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
MMP2P08253 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
MMP2P08253 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC22.31■■□□□ 1.16
MMP2P08253 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
MMP2P08253 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC22.31■■□□□ 1.16
MMP2P08253 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC22.31■■□□□ 1.16
MMP2P08253 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC22.31■■□□□ 1.16
MMP2P08253 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC22.31■■□□□ 1.16
MMP2P08253 AC011298.3-201ENST00000615796 283 ntBASIC22.31■■□□□ 1.16
MMP2P08253 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC22.31■■□□□ 1.16
MMP2P08253 AC087742.1-201ENST00000575880 1738 ntBASIC22.31■■□□□ 1.16
MMP2P08253 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC22.31■■□□□ 1.16
MMP2P08253 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC22.3■■□□□ 1.16
MMP2P08253 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
MMP2P08253 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC22.3■■□□□ 1.16
MMP2P08253 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
MMP2P08253 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC22.3■■□□□ 1.16
MMP2P08253 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
MMP2P08253 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
MMP2P08253 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC22.3■■□□□ 1.16
MMP2P08253 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC22.3■■□□□ 1.16
MMP2P08253 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
MMP2P08253 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC22.3■■□□□ 1.16
MMP2P08253 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
MMP2P08253 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
MMP2P08253 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC22.3■■□□□ 1.16
MMP2P08253 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC22.3■■□□□ 1.16
MMP2P08253 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC22.29■■□□□ 1.16
MMP2P08253 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC22.29■■□□□ 1.16
MMP2P08253 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
MMP2P08253 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
MMP2P08253 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
MMP2P08253 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC22.29■■□□□ 1.16
MMP2P08253 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
MMP2P08253 AC136469.2-201ENST00000623944 1028 ntBASIC22.29■■□□□ 1.16
MMP2P08253 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
MMP2P08253 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
MMP2P08253 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
MMP2P08253 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
MMP2P08253 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC22.28■■□□□ 1.16
MMP2P08253 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
MMP2P08253 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
MMP2P08253 AC096631.2-201ENST00000436136 790 ntBASIC22.28■■□□□ 1.16
MMP2P08253 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC22.28■■□□□ 1.16
MMP2P08253 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
MMP2P08253 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
MMP2P08253 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC22.28■■□□□ 1.16
MMP2P08253 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
MMP2P08253 STX4-202ENST00000394998 1498 ntTSL 2 BASIC22.28■■□□□ 1.16
MMP2P08253 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
MMP2P08253 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
MMP2P08253 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
MMP2P08253 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC22.27■■□□□ 1.16
MMP2P08253 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
MMP2P08253 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
MMP2P08253 AC024257.2-201ENST00000549699 147 ntBASIC22.27■■□□□ 1.16
MMP2P08253 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
MMP2P08253 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC22.27■■□□□ 1.16
MMP2P08253 AL136162.1-201ENST00000607711 1078 ntBASIC22.27■■□□□ 1.16
MMP2P08253 AC110285.6-201ENST00000617652 491 ntBASIC22.27■■□□□ 1.16
MMP2P08253 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
MMP2P08253 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC22.27■■□□□ 1.16
MMP2P08253 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
MMP2P08253 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
MMP2P08253 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC22.27■■□□□ 1.16
MMP2P08253 TERT-206ENST00000508104 2486 ntTSL 5 BASIC22.26■■□□□ 1.15
MMP2P08253 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
MMP2P08253 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
MMP2P08253 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
MMP2P08253 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
MMP2P08253 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
MMP2P08253 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
MMP2P08253 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
MMP2P08253 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
MMP2P08253 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC22.26■■□□□ 1.15
MMP2P08253 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
MMP2P08253 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
MMP2P08253 LINC01960-201ENST00000563759 1884 ntBASIC22.26■■□□□ 1.15
MMP2P08253 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC22.26■■□□□ 1.15
MMP2P08253 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC22.26■■□□□ 1.15
MMP2P08253 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
MMP2P08253 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
MMP2P08253 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
MMP2P08253 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC22.25■■□□□ 1.15
MMP2P08253 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
MMP2P08253 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC22.25■■□□□ 1.15
MMP2P08253 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
MMP2P08253 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC22.25■■□□□ 1.15
MMP2P08253 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC22.25■■□□□ 1.15
MMP2P08253 PTMA-205ENST00000410064 814 ntTSL 2 BASIC22.25■■□□□ 1.15
MMP2P08253 OR2I1P-207ENST00000453522 948 ntBASIC22.25■■□□□ 1.15
MMP2P08253 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC22.25■■□□□ 1.15
MMP2P08253 AC010525.1-201ENST00000585559 441 ntBASIC22.25■■□□□ 1.15
MMP2P08253 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
MMP2P08253 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
MMP2P08253 AC233723.2-201ENST00000623798 2106 ntBASIC22.25■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 69 ms