Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
IFNA1P01562 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
IFNA1P01562 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
IFNA1P01562 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
IFNA1P01562 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
IFNA1P01562 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
IFNA1P01562 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
IFNA1P01562 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
IFNA1P01562 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC17.45■□□□□ 0.38
IFNA1P01562 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
IFNA1P01562 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC17.45■□□□□ 0.38
IFNA1P01562 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
IFNA1P01562 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
IFNA1P01562 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
IFNA1P01562 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
IFNA1P01562 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
IFNA1P01562 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
IFNA1P01562 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
IFNA1P01562 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
IFNA1P01562 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
IFNA1P01562 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
IFNA1P01562 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
IFNA1P01562 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
IFNA1P01562 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
IFNA1P01562 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC17.44■□□□□ 0.38
IFNA1P01562 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC17.44■□□□□ 0.38
IFNA1P01562 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC17.44■□□□□ 0.38
IFNA1P01562 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
IFNA1P01562 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC17.44■□□□□ 0.38
IFNA1P01562 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC17.44■□□□□ 0.38
IFNA1P01562 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
IFNA1P01562 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
IFNA1P01562 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
IFNA1P01562 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
IFNA1P01562 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
IFNA1P01562 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
IFNA1P01562 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
IFNA1P01562 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC17.43■□□□□ 0.38
IFNA1P01562 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
IFNA1P01562 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
IFNA1P01562 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
IFNA1P01562 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
IFNA1P01562 AC025884.2-201ENST00000553429 711 ntBASIC17.43■□□□□ 0.38
IFNA1P01562 STX6-204ENST00000542060 4809 ntTSL 2 BASIC17.43■□□□□ 0.38
IFNA1P01562 AC092667.1-201ENST00000434301 2586 ntBASIC17.43■□□□□ 0.38
IFNA1P01562 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC17.43■□□□□ 0.38
IFNA1P01562 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
IFNA1P01562 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
IFNA1P01562 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
IFNA1P01562 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
IFNA1P01562 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
IFNA1P01562 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
IFNA1P01562 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
IFNA1P01562 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
IFNA1P01562 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
IFNA1P01562 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
IFNA1P01562 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
IFNA1P01562 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC17.43■□□□□ 0.38
IFNA1P01562 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
IFNA1P01562 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
IFNA1P01562 HCG11-201ENST00000411553 5696 ntBASIC17.43■□□□□ 0.38
IFNA1P01562 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
IFNA1P01562 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
IFNA1P01562 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
IFNA1P01562 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
IFNA1P01562 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
IFNA1P01562 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
IFNA1P01562 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
IFNA1P01562 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC17.42■□□□□ 0.38
IFNA1P01562 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
IFNA1P01562 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
IFNA1P01562 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC17.42■□□□□ 0.38
IFNA1P01562 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC17.42■□□□□ 0.38
IFNA1P01562 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
IFNA1P01562 AC079630.1-202ENST00000618127 1840 ntBASIC17.42■□□□□ 0.38
IFNA1P01562 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC17.42■□□□□ 0.38
IFNA1P01562 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
IFNA1P01562 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
IFNA1P01562 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
IFNA1P01562 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
IFNA1P01562 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
IFNA1P01562 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC17.41■□□□□ 0.38
IFNA1P01562 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC17.41■□□□□ 0.38
IFNA1P01562 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
IFNA1P01562 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
IFNA1P01562 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
IFNA1P01562 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC17.41■□□□□ 0.38
IFNA1P01562 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
IFNA1P01562 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
IFNA1P01562 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
IFNA1P01562 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
IFNA1P01562 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
IFNA1P01562 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
IFNA1P01562 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
IFNA1P01562 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC17.4■□□□□ 0.38
IFNA1P01562 FAM99A-202ENST00000538190 1989 ntBASIC17.4■□□□□ 0.38
IFNA1P01562 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
IFNA1P01562 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC17.4■□□□□ 0.38
IFNA1P01562 AL022069.1-201ENST00000568025 1636 ntBASIC17.4■□□□□ 0.38
IFNA1P01562 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms