Protein–RNA interactions for Protein: P01138

NGF, Beta-nerve growth factor, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NGFP01138 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NGFP01138 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC19.12■□□□□ 0.65
NGFP01138 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
NGFP01138 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NGFP01138 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC19.11■□□□□ 0.65
NGFP01138 AC133637.1-201ENST00000624115 1537 ntBASIC19.11■□□□□ 0.65
NGFP01138 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC19.11■□□□□ 0.65
NGFP01138 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NGFP01138 AC019069.1-201ENST00000610008 1333 ntBASIC19.11■□□□□ 0.65
NGFP01138 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NGFP01138 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC19.11■□□□□ 0.65
NGFP01138 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC19.11■□□□□ 0.65
NGFP01138 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NGFP01138 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC19.11■□□□□ 0.65
NGFP01138 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC19.11■□□□□ 0.65
NGFP01138 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC19.11■□□□□ 0.65
NGFP01138 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
NGFP01138 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC19.11■□□□□ 0.65
NGFP01138 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NGFP01138 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC19.11■□□□□ 0.65
NGFP01138 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
NGFP01138 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
NGFP01138 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
NGFP01138 GALC-202ENST00000393568 2054 ntTSL 2 BASIC19.1■□□□□ 0.65
NGFP01138 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NGFP01138 UNC93B3-201ENST00000308076 687 ntBASIC19.1■□□□□ 0.65
NGFP01138 HES6-206ENST00000409574 738 ntTSL 2 BASIC19.1■□□□□ 0.65
NGFP01138 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
NGFP01138 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
NGFP01138 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
NGFP01138 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NGFP01138 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC19.09■□□□□ 0.65
NGFP01138 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
NGFP01138 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
NGFP01138 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
NGFP01138 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC19.09■□□□□ 0.65
NGFP01138 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NGFP01138 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
NGFP01138 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
NGFP01138 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
NGFP01138 AC096631.2-201ENST00000436136 790 ntBASIC19.09■□□□□ 0.65
NGFP01138 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NGFP01138 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC19.09■□□□□ 0.65
NGFP01138 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NGFP01138 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NGFP01138 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC19.08■□□□□ 0.65
NGFP01138 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC19.08■□□□□ 0.65
NGFP01138 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC19.08■□□□□ 0.65
NGFP01138 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
NGFP01138 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
NGFP01138 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC19.08■□□□□ 0.64
NGFP01138 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
NGFP01138 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
NGFP01138 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC19.08■□□□□ 0.64
NGFP01138 SF1-220ENST00000626028 704 ntTSL 2 BASIC19.08■□□□□ 0.64
NGFP01138 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
NGFP01138 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC19.08■□□□□ 0.64
NGFP01138 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
NGFP01138 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
NGFP01138 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
NGFP01138 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC19.07■□□□□ 0.64
NGFP01138 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC19.07■□□□□ 0.64
NGFP01138 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC19.07■□□□□ 0.64
NGFP01138 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
NGFP01138 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NGFP01138 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
NGFP01138 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
NGFP01138 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NGFP01138 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NGFP01138 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC19.06■□□□□ 0.64
NGFP01138 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
NGFP01138 AL138724.1-201ENST00000606771 1088 ntBASIC19.06■□□□□ 0.64
NGFP01138 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
NGFP01138 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
NGFP01138 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC19.06■□□□□ 0.64
NGFP01138 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
NGFP01138 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
NGFP01138 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
NGFP01138 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
NGFP01138 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
NGFP01138 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
NGFP01138 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
NGFP01138 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC19.05■□□□□ 0.64
NGFP01138 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NGFP01138 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NGFP01138 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NGFP01138 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NGFP01138 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
NGFP01138 AL136162.1-201ENST00000607711 1078 ntBASIC19.05■□□□□ 0.64
NGFP01138 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC19.05■□□□□ 0.64
NGFP01138 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC19.05■□□□□ 0.64
NGFP01138 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC19.05■□□□□ 0.64
NGFP01138 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
NGFP01138 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC19.04■□□□□ 0.64
NGFP01138 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
NGFP01138 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
NGFP01138 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
NGFP01138 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC19.04■□□□□ 0.64
NGFP01138 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC19.04■□□□□ 0.64
NGFP01138 AC024257.2-201ENST00000549699 147 ntBASIC19.04■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms