Protein–RNA interactions for Protein: O75631

UPK3A, Uroplakin-3a, humanhuman

Predictions only

Length 287 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3AO75631 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
UPK3AO75631 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
UPK3AO75631 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
UPK3AO75631 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
UPK3AO75631 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
UPK3AO75631 LINC01529-204ENST00000636474 1715 ntBASIC19.76■□□□□ 0.75
UPK3AO75631 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
UPK3AO75631 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC19.75■□□□□ 0.75
UPK3AO75631 FP325331.1-202ENST00000623531 1380 ntBASIC19.75■□□□□ 0.75
UPK3AO75631 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
UPK3AO75631 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC19.75■□□□□ 0.75
UPK3AO75631 AC099791.2-201ENST00000605725 427 ntBASIC19.75■□□□□ 0.75
UPK3AO75631 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC19.75■□□□□ 0.75
UPK3AO75631 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
UPK3AO75631 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
UPK3AO75631 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC19.75■□□□□ 0.75
UPK3AO75631 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
UPK3AO75631 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC19.75■□□□□ 0.75
UPK3AO75631 AC127496.7-201ENST00000625110 1798 ntBASIC19.75■□□□□ 0.75
UPK3AO75631 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC19.75■□□□□ 0.75
UPK3AO75631 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
UPK3AO75631 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
UPK3AO75631 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
UPK3AO75631 ESRRAP2-201ENST00000418437 1549 ntBASIC19.74■□□□□ 0.75
UPK3AO75631 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
UPK3AO75631 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
UPK3AO75631 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
UPK3AO75631 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC19.73■□□□□ 0.75
UPK3AO75631 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC19.73■□□□□ 0.75
UPK3AO75631 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC19.73■□□□□ 0.75
UPK3AO75631 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
UPK3AO75631 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
UPK3AO75631 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC19.73■□□□□ 0.75
UPK3AO75631 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
UPK3AO75631 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
UPK3AO75631 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
UPK3AO75631 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
UPK3AO75631 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
UPK3AO75631 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
UPK3AO75631 AC006455.2-201ENST00000429931 906 ntBASIC19.72■□□□□ 0.75
UPK3AO75631 PEMT-206ENST00000435340 960 ntTSL 5 BASIC19.72■□□□□ 0.75
UPK3AO75631 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC19.72■□□□□ 0.75
UPK3AO75631 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC19.72■□□□□ 0.75
UPK3AO75631 DUX4L4-201ENST00000566884 1269 ntBASIC19.72■□□□□ 0.75
UPK3AO75631 AC241377.3-202ENST00000626088 1088 ntBASIC19.72■□□□□ 0.75
UPK3AO75631 AC241585.3-202ENST00000628937 1088 ntBASIC19.72■□□□□ 0.75
UPK3AO75631 AC245100.8-202ENST00000629247 1058 ntBASIC19.72■□□□□ 0.75
UPK3AO75631 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
UPK3AO75631 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
UPK3AO75631 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
UPK3AO75631 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
UPK3AO75631 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC19.72■□□□□ 0.75
UPK3AO75631 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
UPK3AO75631 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
UPK3AO75631 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
UPK3AO75631 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
UPK3AO75631 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
UPK3AO75631 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
UPK3AO75631 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
UPK3AO75631 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
UPK3AO75631 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC19.71■□□□□ 0.75
UPK3AO75631 AC009086.3-201ENST00000623486 1008 ntBASIC19.71■□□□□ 0.75
UPK3AO75631 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
UPK3AO75631 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC19.71■□□□□ 0.75
UPK3AO75631 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
UPK3AO75631 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC19.71■□□□□ 0.75
UPK3AO75631 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
UPK3AO75631 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
UPK3AO75631 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
UPK3AO75631 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
UPK3AO75631 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC19.7■□□□□ 0.74
UPK3AO75631 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC19.7■□□□□ 0.74
UPK3AO75631 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
UPK3AO75631 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
UPK3AO75631 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
UPK3AO75631 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
UPK3AO75631 AC242852.2-201ENST00000615738 1807 ntBASIC19.7■□□□□ 0.74
UPK3AO75631 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
UPK3AO75631 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC19.7■□□□□ 0.74
UPK3AO75631 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC19.7■□□□□ 0.74
UPK3AO75631 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
UPK3AO75631 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
UPK3AO75631 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
UPK3AO75631 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
UPK3AO75631 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
UPK3AO75631 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
UPK3AO75631 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC19.69■□□□□ 0.74
UPK3AO75631 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
UPK3AO75631 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
UPK3AO75631 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC19.69■□□□□ 0.74
UPK3AO75631 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
UPK3AO75631 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
UPK3AO75631 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
UPK3AO75631 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
UPK3AO75631 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
UPK3AO75631 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
UPK3AO75631 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC19.69■□□□□ 0.74
UPK3AO75631 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC19.69■□□□□ 0.74
UPK3AO75631 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
UPK3AO75631 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms