Protein–RNA interactions for Protein: O75489

NDUFS3, NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3O75489 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
NDUFS3O75489 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
NDUFS3O75489 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
NDUFS3O75489 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
NDUFS3O75489 AC004687.1-201ENST00000579003 1625 ntBASIC21.95■■□□□ 1.1
NDUFS3O75489 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
NDUFS3O75489 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
NDUFS3O75489 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
NDUFS3O75489 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
NDUFS3O75489 RPP21-222ENST00000433076 577 ntTSL 2 BASIC21.95■■□□□ 1.1
NDUFS3O75489 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC21.95■■□□□ 1.1
NDUFS3O75489 QDPR-206ENST00000508623 601 ntTSL 3 BASIC21.95■■□□□ 1.1
NDUFS3O75489 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC21.95■■□□□ 1.1
NDUFS3O75489 AC099791.2-201ENST00000605725 427 ntBASIC21.95■■□□□ 1.1
NDUFS3O75489 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
NDUFS3O75489 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
NDUFS3O75489 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
NDUFS3O75489 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
NDUFS3O75489 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
NDUFS3O75489 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
NDUFS3O75489 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
NDUFS3O75489 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC21.94■■□□□ 1.1
NDUFS3O75489 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
NDUFS3O75489 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
NDUFS3O75489 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC21.94■■□□□ 1.1
NDUFS3O75489 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC21.94■■□□□ 1.1
NDUFS3O75489 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC21.94■■□□□ 1.1
NDUFS3O75489 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC21.94■■□□□ 1.1
NDUFS3O75489 TRIR-202ENST00000588213 841 ntTSL 3 BASIC21.94■■□□□ 1.1
NDUFS3O75489 AL512631.2-201ENST00000604634 923 ntBASIC21.94■■□□□ 1.1
NDUFS3O75489 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
NDUFS3O75489 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC21.94■■□□□ 1.1
NDUFS3O75489 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC21.94■■□□□ 1.1
NDUFS3O75489 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
NDUFS3O75489 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
NDUFS3O75489 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
NDUFS3O75489 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC21.94■■□□□ 1.1
NDUFS3O75489 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC21.94■■□□□ 1.1
NDUFS3O75489 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
NDUFS3O75489 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
NDUFS3O75489 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
NDUFS3O75489 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
NDUFS3O75489 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
NDUFS3O75489 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC21.93■■□□□ 1.1
NDUFS3O75489 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
NDUFS3O75489 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC21.93■■□□□ 1.1
NDUFS3O75489 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
NDUFS3O75489 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
NDUFS3O75489 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
NDUFS3O75489 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
NDUFS3O75489 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC21.93■■□□□ 1.1
NDUFS3O75489 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC21.93■■□□□ 1.1
NDUFS3O75489 AL499627.2-201ENST00000606283 725 ntBASIC21.93■■□□□ 1.1
NDUFS3O75489 AL117328.2-201ENST00000624617 1940 ntBASIC21.93■■□□□ 1.1
NDUFS3O75489 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC21.93■■□□□ 1.1
NDUFS3O75489 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
NDUFS3O75489 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
NDUFS3O75489 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
NDUFS3O75489 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
NDUFS3O75489 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
NDUFS3O75489 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC21.92■■□□□ 1.1
NDUFS3O75489 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC21.92■■□□□ 1.1
NDUFS3O75489 TERT-206ENST00000508104 2486 ntTSL 5 BASIC21.92■■□□□ 1.1
NDUFS3O75489 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
NDUFS3O75489 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
NDUFS3O75489 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
NDUFS3O75489 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC21.91■■□□□ 1.1
NDUFS3O75489 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
NDUFS3O75489 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
NDUFS3O75489 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
NDUFS3O75489 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
NDUFS3O75489 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
NDUFS3O75489 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
NDUFS3O75489 AC006455.2-201ENST00000429931 906 ntBASIC21.91■■□□□ 1.1
NDUFS3O75489 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
NDUFS3O75489 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
NDUFS3O75489 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
NDUFS3O75489 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
NDUFS3O75489 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
NDUFS3O75489 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
NDUFS3O75489 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
NDUFS3O75489 GTSE1-AS1-202ENST00000623117 1518 ntBASIC21.9■■□□□ 1.1
NDUFS3O75489 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
NDUFS3O75489 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
NDUFS3O75489 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
NDUFS3O75489 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
NDUFS3O75489 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
NDUFS3O75489 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
NDUFS3O75489 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
NDUFS3O75489 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
NDUFS3O75489 AC092171.4-201ENST00000609130 632 ntBASIC21.9■■□□□ 1.1
NDUFS3O75489 pRNA.6-201ENST00000610482 90 ntBASIC21.9■■□□□ 1.1
NDUFS3O75489 pRNA.5-201ENST00000612139 90 ntBASIC21.9■■□□□ 1.1
NDUFS3O75489 pRNA.11-201ENST00000618423 90 ntBASIC21.9■■□□□ 1.1
NDUFS3O75489 pRNA.13-201ENST00000619112 90 ntBASIC21.9■■□□□ 1.1
NDUFS3O75489 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
NDUFS3O75489 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC21.9■■□□□ 1.1
NDUFS3O75489 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC21.9■■□□□ 1.1
NDUFS3O75489 GUSBP5-202ENST00000510805 1989 ntBASIC21.9■■□□□ 1.1
NDUFS3O75489 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms