Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PFDN1O60925 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
PFDN1O60925 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
PFDN1O60925 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PFDN1O60925 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PFDN1O60925 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC19.82■□□□□ 0.76
PFDN1O60925 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
PFDN1O60925 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PFDN1O60925 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PFDN1O60925 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
PFDN1O60925 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC19.81■□□□□ 0.76
PFDN1O60925 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PFDN1O60925 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
PFDN1O60925 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PFDN1O60925 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
PFDN1O60925 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PFDN1O60925 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
PFDN1O60925 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PFDN1O60925 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
PFDN1O60925 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PFDN1O60925 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PFDN1O60925 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
PFDN1O60925 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC19.81■□□□□ 0.76
PFDN1O60925 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC19.81■□□□□ 0.76
PFDN1O60925 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC19.81■□□□□ 0.76
PFDN1O60925 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
PFDN1O60925 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PFDN1O60925 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PFDN1O60925 LETM1P2-201ENST00000597330 2178 ntBASIC19.8■□□□□ 0.76
PFDN1O60925 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC19.8■□□□□ 0.76
PFDN1O60925 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PFDN1O60925 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC19.8■□□□□ 0.76
PFDN1O60925 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PFDN1O60925 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
PFDN1O60925 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC19.8■□□□□ 0.76
PFDN1O60925 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
PFDN1O60925 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
PFDN1O60925 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PFDN1O60925 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PFDN1O60925 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC19.79■□□□□ 0.76
PFDN1O60925 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC19.79■□□□□ 0.76
PFDN1O60925 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
PFDN1O60925 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PFDN1O60925 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC19.79■□□□□ 0.76
PFDN1O60925 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC19.79■□□□□ 0.76
PFDN1O60925 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
PFDN1O60925 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC19.79■□□□□ 0.76
PFDN1O60925 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC19.79■□□□□ 0.76
PFDN1O60925 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC19.79■□□□□ 0.76
PFDN1O60925 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PFDN1O60925 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PFDN1O60925 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
PFDN1O60925 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
PFDN1O60925 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
PFDN1O60925 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC19.78■□□□□ 0.76
PFDN1O60925 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC19.78■□□□□ 0.76
PFDN1O60925 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PFDN1O60925 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC19.78■□□□□ 0.76
PFDN1O60925 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
PFDN1O60925 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PFDN1O60925 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
PFDN1O60925 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
PFDN1O60925 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC19.78■□□□□ 0.76
PFDN1O60925 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
PFDN1O60925 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PFDN1O60925 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC19.78■□□□□ 0.76
PFDN1O60925 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
PFDN1O60925 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PFDN1O60925 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
PFDN1O60925 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC19.78■□□□□ 0.76
PFDN1O60925 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
PFDN1O60925 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PFDN1O60925 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PFDN1O60925 ADM-207ENST00000530439 1839 ntTSL 2 BASIC19.77■□□□□ 0.76
PFDN1O60925 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PFDN1O60925 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PFDN1O60925 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PFDN1O60925 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
PFDN1O60925 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
PFDN1O60925 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
PFDN1O60925 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
PFDN1O60925 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.75
PFDN1O60925 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
PFDN1O60925 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PFDN1O60925 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PFDN1O60925 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PFDN1O60925 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
PFDN1O60925 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PFDN1O60925 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PFDN1O60925 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PFDN1O60925 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC19.76■□□□□ 0.75
PFDN1O60925 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PFDN1O60925 FAM99A-202ENST00000538190 1989 ntBASIC19.75■□□□□ 0.75
PFDN1O60925 AC139530.1-201ENST00000575312 1977 ntBASIC19.75■□□□□ 0.75
PFDN1O60925 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PFDN1O60925 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PFDN1O60925 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PFDN1O60925 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
PFDN1O60925 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
PFDN1O60925 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms