Protein–RNA interactions for Protein: O43567

RNF13, E3 ubiquitin-protein ligase RNF13, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13O43567 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RNF13O43567 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RNF13O43567 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
RNF13O43567 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC20.03■□□□□ 0.8
RNF13O43567 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC20.03■□□□□ 0.8
RNF13O43567 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
RNF13O43567 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC20.03■□□□□ 0.8
RNF13O43567 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RNF13O43567 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
RNF13O43567 OR2A1-AS1-204ENST00000470435 602 ntBASIC20.03■□□□□ 0.8
RNF13O43567 CREM-229ENST00000474362 1030 ntTSL 2 BASIC20.03■□□□□ 0.8
RNF13O43567 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
RNF13O43567 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RNF13O43567 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RNF13O43567 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
RNF13O43567 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
RNF13O43567 LSM4-201ENST00000252816 986 ntTSL 2 BASIC20.02■□□□□ 0.8
RNF13O43567 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RNF13O43567 UNC93B8-201ENST00000511903 705 ntBASIC20.02■□□□□ 0.8
RNF13O43567 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC20.02■□□□□ 0.8
RNF13O43567 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
RNF13O43567 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
RNF13O43567 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
RNF13O43567 COMT-203ENST00000403184 2217 ntTSL 2 BASIC20.02■□□□□ 0.79
RNF13O43567 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
RNF13O43567 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
RNF13O43567 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.01■□□□□ 0.79
RNF13O43567 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC20.01■□□□□ 0.79
RNF13O43567 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
RNF13O43567 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
RNF13O43567 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC20■□□□□ 0.79
RNF13O43567 LINC01529-204ENST00000636474 1715 ntBASIC20■□□□□ 0.79
RNF13O43567 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC20■□□□□ 0.79
RNF13O43567 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC20■□□□□ 0.79
RNF13O43567 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC20■□□□□ 0.79
RNF13O43567 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC20■□□□□ 0.79
RNF13O43567 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC20■□□□□ 0.79
RNF13O43567 EFS-203ENST00000429593 2610 ntTSL 2 BASIC20■□□□□ 0.79
RNF13O43567 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RNF13O43567 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RNF13O43567 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RNF13O43567 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC19.99■□□□□ 0.79
RNF13O43567 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC19.99■□□□□ 0.79
RNF13O43567 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
RNF13O43567 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
RNF13O43567 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC19.99■□□□□ 0.79
RNF13O43567 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC19.99■□□□□ 0.79
RNF13O43567 MIR6724-1-201ENST00000616420 92 ntBASIC19.99■□□□□ 0.79
RNF13O43567 MIR6724-2-201ENST00000616483 92 ntBASIC19.99■□□□□ 0.79
RNF13O43567 MIR6724-4-201ENST00000617390 92 ntBASIC19.99■□□□□ 0.79
RNF13O43567 MIR6724-3-201ENST00000622482 92 ntBASIC19.99■□□□□ 0.79
RNF13O43567 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
RNF13O43567 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RNF13O43567 GCA-201ENST00000233612 1694 ntTSL 2 BASIC19.99■□□□□ 0.79
RNF13O43567 AC242852.2-201ENST00000615738 1807 ntBASIC19.99■□□□□ 0.79
RNF13O43567 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RNF13O43567 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
RNF13O43567 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RNF13O43567 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC19.98■□□□□ 0.79
RNF13O43567 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC19.98■□□□□ 0.79
RNF13O43567 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
RNF13O43567 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
RNF13O43567 AC009102.2-201ENST00000606772 1639 ntBASIC19.98■□□□□ 0.79
RNF13O43567 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC19.98■□□□□ 0.79
RNF13O43567 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RNF13O43567 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
RNF13O43567 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
RNF13O43567 KRT16P3-201ENST00000439127 1283 ntBASIC19.98■□□□□ 0.79
RNF13O43567 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RNF13O43567 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
RNF13O43567 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RNF13O43567 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
RNF13O43567 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
RNF13O43567 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
RNF13O43567 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC19.97■□□□□ 0.79
RNF13O43567 FP325331.1-202ENST00000623531 1380 ntBASIC19.97■□□□□ 0.79
RNF13O43567 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RNF13O43567 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC19.97■□□□□ 0.79
RNF13O43567 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC19.97■□□□□ 0.79
RNF13O43567 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
RNF13O43567 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RNF13O43567 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
RNF13O43567 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RNF13O43567 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RNF13O43567 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
RNF13O43567 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
RNF13O43567 AC007375.3-201ENST00000600936 2314 ntBASIC19.96■□□□□ 0.79
RNF13O43567 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC19.96■□□□□ 0.79
RNF13O43567 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC19.96■□□□□ 0.79
RNF13O43567 NKILA-201ENST00000613231 537 ntTSL 4 BASIC19.96■□□□□ 0.79
RNF13O43567 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC19.96■□□□□ 0.79
RNF13O43567 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
RNF13O43567 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RNF13O43567 ESRRAP2-201ENST00000418437 1549 ntBASIC19.96■□□□□ 0.79
RNF13O43567 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
RNF13O43567 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RNF13O43567 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RNF13O43567 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC19.95■□□□□ 0.78
RNF13O43567 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RNF13O43567 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms