Protein–RNA interactions for Protein: O15266

SHOX, Short stature homeobox protein, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOXO15266 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
SHOXO15266 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SHOXO15266 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC18.71■□□□□ 0.59
SHOXO15266 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SHOXO15266 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
SHOXO15266 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
SHOXO15266 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
SHOXO15266 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SHOXO15266 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SHOXO15266 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
SHOXO15266 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC18.7■□□□□ 0.58
SHOXO15266 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC18.7■□□□□ 0.58
SHOXO15266 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SHOXO15266 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SHOXO15266 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
SHOXO15266 LONRF2P2-201ENST00000439212 571 ntBASIC18.7■□□□□ 0.58
SHOXO15266 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
SHOXO15266 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SHOXO15266 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC18.7■□□□□ 0.58
SHOXO15266 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SHOXO15266 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
SHOXO15266 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
SHOXO15266 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
SHOXO15266 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC18.7■□□□□ 0.58
SHOXO15266 BID-212ENST00000614949 1988 ntTSL 5 BASIC18.7■□□□□ 0.58
SHOXO15266 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SHOXO15266 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
SHOXO15266 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
SHOXO15266 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SHOXO15266 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SHOXO15266 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
SHOXO15266 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC18.69■□□□□ 0.58
SHOXO15266 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SHOXO15266 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC18.69■□□□□ 0.58
SHOXO15266 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SHOXO15266 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SHOXO15266 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
SHOXO15266 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SHOXO15266 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC18.69■□□□□ 0.58
SHOXO15266 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SHOXO15266 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
SHOXO15266 DUX4L18-201ENST00000553347 1267 ntBASIC18.69■□□□□ 0.58
SHOXO15266 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
SHOXO15266 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
SHOXO15266 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
SHOXO15266 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC18.69■□□□□ 0.58
SHOXO15266 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SHOXO15266 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SHOXO15266 SHD-204ENST00000599689 1729 ntTSL 5 BASIC18.69■□□□□ 0.58
SHOXO15266 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SHOXO15266 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SHOXO15266 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SHOXO15266 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
SHOXO15266 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC18.68■□□□□ 0.58
SHOXO15266 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.68■□□□□ 0.58
SHOXO15266 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
SHOXO15266 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SHOXO15266 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
SHOXO15266 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
SHOXO15266 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SHOXO15266 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SHOXO15266 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC18.68■□□□□ 0.58
SHOXO15266 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SHOXO15266 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC18.68■□□□□ 0.58
SHOXO15266 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
SHOXO15266 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SHOXO15266 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
SHOXO15266 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
SHOXO15266 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC18.67■□□□□ 0.58
SHOXO15266 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SHOXO15266 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SHOXO15266 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
SHOXO15266 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SHOXO15266 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SHOXO15266 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SHOXO15266 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SHOXO15266 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SHOXO15266 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SHOXO15266 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SHOXO15266 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC18.66■□□□□ 0.58
SHOXO15266 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
SHOXO15266 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SHOXO15266 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SHOXO15266 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC18.66■□□□□ 0.58
SHOXO15266 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC18.66■□□□□ 0.58
SHOXO15266 BHLHE23-202ENST00000612929 1109 ntBASIC18.66■□□□□ 0.58
SHOXO15266 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SHOXO15266 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SHOXO15266 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
SHOXO15266 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SHOXO15266 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SHOXO15266 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
SHOXO15266 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SHOXO15266 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
SHOXO15266 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
SHOXO15266 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SHOXO15266 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
SHOXO15266 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SHOXO15266 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
SHOXO15266 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms