Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
NPIPA2E9PIF3 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
NPIPA2E9PIF3 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NPIPA2E9PIF3 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
NPIPA2E9PIF3 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC20.05■□□□□ 0.8
NPIPA2E9PIF3 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC20.05■□□□□ 0.8
NPIPA2E9PIF3 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC20.05■□□□□ 0.8
NPIPA2E9PIF3 AL499627.2-201ENST00000606283 725 ntBASIC20.05■□□□□ 0.8
NPIPA2E9PIF3 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC20.05■□□□□ 0.8
NPIPA2E9PIF3 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC20.05■□□□□ 0.8
NPIPA2E9PIF3 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
NPIPA2E9PIF3 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC20.05■□□□□ 0.8
NPIPA2E9PIF3 AC144652.1-201ENST00000609974 1624 ntBASIC20.05■□□□□ 0.8
NPIPA2E9PIF3 LINC01529-204ENST00000636474 1715 ntBASIC20.05■□□□□ 0.8
NPIPA2E9PIF3 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NPIPA2E9PIF3 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
NPIPA2E9PIF3 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
NPIPA2E9PIF3 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
NPIPA2E9PIF3 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
NPIPA2E9PIF3 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NPIPA2E9PIF3 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NPIPA2E9PIF3 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NPIPA2E9PIF3 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC20.04■□□□□ 0.8
NPIPA2E9PIF3 PARL-206ENST00000435888 1098 ntTSL 5 BASIC20.04■□□□□ 0.8
NPIPA2E9PIF3 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NPIPA2E9PIF3 DUX4L4-201ENST00000566884 1269 ntBASIC20.04■□□□□ 0.8
NPIPA2E9PIF3 SP2-202ENST00000613139 908 ntTSL 5 BASIC20.04■□□□□ 0.8
NPIPA2E9PIF3 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC20.04■□□□□ 0.8
NPIPA2E9PIF3 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC20.04■□□□□ 0.8
NPIPA2E9PIF3 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
NPIPA2E9PIF3 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC20.04■□□□□ 0.8
NPIPA2E9PIF3 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC20.03■□□□□ 0.8
NPIPA2E9PIF3 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC20.03■□□□□ 0.8
NPIPA2E9PIF3 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC20.03■□□□□ 0.8
NPIPA2E9PIF3 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
NPIPA2E9PIF3 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC20.03■□□□□ 0.8
NPIPA2E9PIF3 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
NPIPA2E9PIF3 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
NPIPA2E9PIF3 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC20.03■□□□□ 0.8
NPIPA2E9PIF3 AICDA-202ENST00000537228 667 ntTSL 5 BASIC20.03■□□□□ 0.8
NPIPA2E9PIF3 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NPIPA2E9PIF3 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NPIPA2E9PIF3 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
NPIPA2E9PIF3 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
NPIPA2E9PIF3 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
NPIPA2E9PIF3 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
NPIPA2E9PIF3 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC20.02■□□□□ 0.8
NPIPA2E9PIF3 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
NPIPA2E9PIF3 AK1-201ENST00000223836 736 ntTSL 3 BASIC20.02■□□□□ 0.8
NPIPA2E9PIF3 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
NPIPA2E9PIF3 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC20.02■□□□□ 0.8
NPIPA2E9PIF3 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
NPIPA2E9PIF3 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
NPIPA2E9PIF3 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC20.02■□□□□ 0.8
NPIPA2E9PIF3 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
NPIPA2E9PIF3 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
NPIPA2E9PIF3 H19-210ENST00000439725 1929 ntTSL 2 BASIC20.02■□□□□ 0.79
NPIPA2E9PIF3 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
NPIPA2E9PIF3 AC079630.1-202ENST00000618127 1840 ntBASIC20.02■□□□□ 0.79
NPIPA2E9PIF3 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC20.02■□□□□ 0.79
NPIPA2E9PIF3 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC20.02■□□□□ 0.79
NPIPA2E9PIF3 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC20.02■□□□□ 0.79
NPIPA2E9PIF3 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
NPIPA2E9PIF3 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
NPIPA2E9PIF3 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
NPIPA2E9PIF3 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
NPIPA2E9PIF3 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
NPIPA2E9PIF3 NME4-202ENST00000382940 766 ntTSL 3 BASIC20.01■□□□□ 0.79
NPIPA2E9PIF3 AL162430.1-201ENST00000480705 870 ntBASIC20.01■□□□□ 0.79
NPIPA2E9PIF3 AC010525.1-201ENST00000585559 441 ntBASIC20.01■□□□□ 0.79
NPIPA2E9PIF3 NME4-211ENST00000620944 1193 ntTSL 2 BASIC20.01■□□□□ 0.79
NPIPA2E9PIF3 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.01■□□□□ 0.79
NPIPA2E9PIF3 AC092068.2-201ENST00000590491 1708 ntBASIC20.01■□□□□ 0.79
NPIPA2E9PIF3 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC20.01■□□□□ 0.79
NPIPA2E9PIF3 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
NPIPA2E9PIF3 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
NPIPA2E9PIF3 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC20■□□□□ 0.79
NPIPA2E9PIF3 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
NPIPA2E9PIF3 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC20■□□□□ 0.79
NPIPA2E9PIF3 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC20■□□□□ 0.79
NPIPA2E9PIF3 IGHV3-19-201ENST00000521488 291 ntBASIC20■□□□□ 0.79
NPIPA2E9PIF3 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC20■□□□□ 0.79
NPIPA2E9PIF3 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
NPIPA2E9PIF3 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NPIPA2E9PIF3 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC20■□□□□ 0.79
NPIPA2E9PIF3 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
NPIPA2E9PIF3 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
NPIPA2E9PIF3 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
NPIPA2E9PIF3 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
NPIPA2E9PIF3 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
NPIPA2E9PIF3 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
NPIPA2E9PIF3 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC19.99■□□□□ 0.79
NPIPA2E9PIF3 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC19.99■□□□□ 0.79
NPIPA2E9PIF3 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC19.99■□□□□ 0.79
NPIPA2E9PIF3 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC19.99■□□□□ 0.79
NPIPA2E9PIF3 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
NPIPA2E9PIF3 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
NPIPA2E9PIF3 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
NPIPA2E9PIF3 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
NPIPA2E9PIF3 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms