Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RBFOX3A6NFN3 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
RBFOX3A6NFN3 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
RBFOX3A6NFN3 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC17.42■□□□□ 0.38
RBFOX3A6NFN3 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC17.42■□□□□ 0.38
RBFOX3A6NFN3 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
RBFOX3A6NFN3 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
RBFOX3A6NFN3 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
RBFOX3A6NFN3 AC007952.6-201ENST00000573168 2673 ntBASIC17.41■□□□□ 0.38
RBFOX3A6NFN3 AC003957.1-201ENST00000625108 2673 ntBASIC17.41■□□□□ 0.38
RBFOX3A6NFN3 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC17.41■□□□□ 0.38
RBFOX3A6NFN3 HLA-V-202ENST00000446817 847 ntBASIC17.41■□□□□ 0.38
RBFOX3A6NFN3 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RBFOX3A6NFN3 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RBFOX3A6NFN3 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
RBFOX3A6NFN3 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RBFOX3A6NFN3 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RBFOX3A6NFN3 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC17.4■□□□□ 0.38
RBFOX3A6NFN3 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC17.4■□□□□ 0.38
RBFOX3A6NFN3 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RBFOX3A6NFN3 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RBFOX3A6NFN3 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC17.4■□□□□ 0.38
RBFOX3A6NFN3 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RBFOX3A6NFN3 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
RBFOX3A6NFN3 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC17.4■□□□□ 0.38
RBFOX3A6NFN3 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC17.4■□□□□ 0.38
RBFOX3A6NFN3 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RBFOX3A6NFN3 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
RBFOX3A6NFN3 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RBFOX3A6NFN3 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
RBFOX3A6NFN3 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC17.39■□□□□ 0.38
RBFOX3A6NFN3 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
RBFOX3A6NFN3 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
RBFOX3A6NFN3 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC17.39■□□□□ 0.37
RBFOX3A6NFN3 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC17.39■□□□□ 0.37
RBFOX3A6NFN3 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC17.39■□□□□ 0.37
RBFOX3A6NFN3 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC17.39■□□□□ 0.37
RBFOX3A6NFN3 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
RBFOX3A6NFN3 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
RBFOX3A6NFN3 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RBFOX3A6NFN3 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.37
RBFOX3A6NFN3 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC17.39■□□□□ 0.37
RBFOX3A6NFN3 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
RBFOX3A6NFN3 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
RBFOX3A6NFN3 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RBFOX3A6NFN3 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RBFOX3A6NFN3 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RBFOX3A6NFN3 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
RBFOX3A6NFN3 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RBFOX3A6NFN3 MIR3960-201ENST00000583311 91 ntBASIC17.38■□□□□ 0.37
RBFOX3A6NFN3 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC17.38■□□□□ 0.37
RBFOX3A6NFN3 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RBFOX3A6NFN3 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
RBFOX3A6NFN3 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RBFOX3A6NFN3 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RBFOX3A6NFN3 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RBFOX3A6NFN3 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
RBFOX3A6NFN3 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC17.38■□□□□ 0.37
RBFOX3A6NFN3 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RBFOX3A6NFN3 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RBFOX3A6NFN3 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
RBFOX3A6NFN3 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RBFOX3A6NFN3 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
RBFOX3A6NFN3 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RBFOX3A6NFN3 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RBFOX3A6NFN3 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC17.37■□□□□ 0.37
RBFOX3A6NFN3 DUX4L13-201ENST00000554103 1267 ntBASIC17.37■□□□□ 0.37
RBFOX3A6NFN3 DUX4L15-201ENST00000611059 1267 ntBASIC17.37■□□□□ 0.37
RBFOX3A6NFN3 DUX4L23-201ENST00000615195 1269 ntBASIC17.37■□□□□ 0.37
RBFOX3A6NFN3 DUX4L24-201ENST00000617576 1269 ntBASIC17.37■□□□□ 0.37
RBFOX3A6NFN3 DUX4L22-201ENST00000618238 1269 ntBASIC17.37■□□□□ 0.37
RBFOX3A6NFN3 DUX4L20-201ENST00000619712 1269 ntBASIC17.37■□□□□ 0.37
RBFOX3A6NFN3 DUX4L21-201ENST00000622058 1269 ntBASIC17.37■□□□□ 0.37
RBFOX3A6NFN3 DUX4L10-201ENST00000622460 1267 ntBASIC17.37■□□□□ 0.37
RBFOX3A6NFN3 DUX4L25-201ENST00000624915 1269 ntBASIC17.37■□□□□ 0.37
RBFOX3A6NFN3 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RBFOX3A6NFN3 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RBFOX3A6NFN3 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RBFOX3A6NFN3 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC17.37■□□□□ 0.37
RBFOX3A6NFN3 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RBFOX3A6NFN3 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC17.37■□□□□ 0.37
RBFOX3A6NFN3 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RBFOX3A6NFN3 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RBFOX3A6NFN3 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RBFOX3A6NFN3 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RBFOX3A6NFN3 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC17.36■□□□□ 0.37
RBFOX3A6NFN3 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC17.36■□□□□ 0.37
RBFOX3A6NFN3 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
RBFOX3A6NFN3 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC17.36■□□□□ 0.37
RBFOX3A6NFN3 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RBFOX3A6NFN3 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
RBFOX3A6NFN3 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RBFOX3A6NFN3 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
RBFOX3A6NFN3 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC17.36■□□□□ 0.37
RBFOX3A6NFN3 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
RBFOX3A6NFN3 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RBFOX3A6NFN3 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RBFOX3A6NFN3 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC17.36■□□□□ 0.37
RBFOX3A6NFN3 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
RBFOX3A6NFN3 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms