Protein–RNA interactions for Protein: A0A0C4DH59

TRBV5-4, T-cell receptor beta variable 5-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-4A0A0C4DH59 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC21.85■■□□□ 1.09
TRBV5-4A0A0C4DH59 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
TRBV5-4A0A0C4DH59 AC133561.1-201ENST00000568600 2415 ntBASIC21.85■■□□□ 1.09
TRBV5-4A0A0C4DH59 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
TRBV5-4A0A0C4DH59 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
TRBV5-4A0A0C4DH59 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
TRBV5-4A0A0C4DH59 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
TRBV5-4A0A0C4DH59 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC21.84■■□□□ 1.09
TRBV5-4A0A0C4DH59 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC21.84■■□□□ 1.09
TRBV5-4A0A0C4DH59 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
TRBV5-4A0A0C4DH59 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
TRBV5-4A0A0C4DH59 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
TRBV5-4A0A0C4DH59 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
TRBV5-4A0A0C4DH59 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
TRBV5-4A0A0C4DH59 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC21.84■■□□□ 1.09
TRBV5-4A0A0C4DH59 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC21.84■■□□□ 1.09
TRBV5-4A0A0C4DH59 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
TRBV5-4A0A0C4DH59 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC21.84■■□□□ 1.09
TRBV5-4A0A0C4DH59 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
TRBV5-4A0A0C4DH59 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
TRBV5-4A0A0C4DH59 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC21.84■■□□□ 1.09
TRBV5-4A0A0C4DH59 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC21.84■■□□□ 1.09
TRBV5-4A0A0C4DH59 ESRRAP2-201ENST00000418437 1549 ntBASIC21.84■■□□□ 1.09
TRBV5-4A0A0C4DH59 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC21.84■■□□□ 1.09
TRBV5-4A0A0C4DH59 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC21.84■■□□□ 1.09
TRBV5-4A0A0C4DH59 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
TRBV5-4A0A0C4DH59 STX4-202ENST00000394998 1498 ntTSL 2 BASIC21.83■■□□□ 1.09
TRBV5-4A0A0C4DH59 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC21.83■■□□□ 1.09
TRBV5-4A0A0C4DH59 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
TRBV5-4A0A0C4DH59 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
TRBV5-4A0A0C4DH59 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
TRBV5-4A0A0C4DH59 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
TRBV5-4A0A0C4DH59 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC21.83■■□□□ 1.09
TRBV5-4A0A0C4DH59 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC21.83■■□□□ 1.09
TRBV5-4A0A0C4DH59 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
TRBV5-4A0A0C4DH59 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
TRBV5-4A0A0C4DH59 AC087742.1-201ENST00000575880 1738 ntBASIC21.83■■□□□ 1.08
TRBV5-4A0A0C4DH59 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC21.83■■□□□ 1.08
TRBV5-4A0A0C4DH59 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
TRBV5-4A0A0C4DH59 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
TRBV5-4A0A0C4DH59 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
TRBV5-4A0A0C4DH59 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC21.82■■□□□ 1.08
TRBV5-4A0A0C4DH59 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
TRBV5-4A0A0C4DH59 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC21.82■■□□□ 1.08
TRBV5-4A0A0C4DH59 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
TRBV5-4A0A0C4DH59 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
TRBV5-4A0A0C4DH59 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
TRBV5-4A0A0C4DH59 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
TRBV5-4A0A0C4DH59 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC21.81■■□□□ 1.08
TRBV5-4A0A0C4DH59 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
TRBV5-4A0A0C4DH59 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
TRBV5-4A0A0C4DH59 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
TRBV5-4A0A0C4DH59 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC21.81■■□□□ 1.08
TRBV5-4A0A0C4DH59 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
TRBV5-4A0A0C4DH59 PTMA-205ENST00000410064 814 ntTSL 2 BASIC21.81■■□□□ 1.08
TRBV5-4A0A0C4DH59 AC096631.2-201ENST00000436136 790 ntBASIC21.81■■□□□ 1.08
TRBV5-4A0A0C4DH59 AC024257.2-201ENST00000549699 147 ntBASIC21.81■■□□□ 1.08
TRBV5-4A0A0C4DH59 AL136162.1-201ENST00000607711 1078 ntBASIC21.81■■□□□ 1.08
TRBV5-4A0A0C4DH59 AL031602.1-201ENST00000633169 911 ntBASIC21.81■■□□□ 1.08
TRBV5-4A0A0C4DH59 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
TRBV5-4A0A0C4DH59 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
TRBV5-4A0A0C4DH59 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
TRBV5-4A0A0C4DH59 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TRBV5-4A0A0C4DH59 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
TRBV5-4A0A0C4DH59 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TRBV5-4A0A0C4DH59 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
TRBV5-4A0A0C4DH59 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC21.8■■□□□ 1.08
TRBV5-4A0A0C4DH59 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
TRBV5-4A0A0C4DH59 LINC01960-201ENST00000563759 1884 ntBASIC21.8■■□□□ 1.08
TRBV5-4A0A0C4DH59 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TRBV5-4A0A0C4DH59 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
TRBV5-4A0A0C4DH59 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TRBV5-4A0A0C4DH59 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
TRBV5-4A0A0C4DH59 AC110285.6-201ENST00000617652 491 ntBASIC21.8■■□□□ 1.08
TRBV5-4A0A0C4DH59 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
TRBV5-4A0A0C4DH59 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
TRBV5-4A0A0C4DH59 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
TRBV5-4A0A0C4DH59 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
TRBV5-4A0A0C4DH59 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
TRBV5-4A0A0C4DH59 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC21.79■■□□□ 1.08
TRBV5-4A0A0C4DH59 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
TRBV5-4A0A0C4DH59 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TRBV5-4A0A0C4DH59 SNX3-202ENST00000349379 890 ntTSL 2 BASIC21.79■■□□□ 1.08
TRBV5-4A0A0C4DH59 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TRBV5-4A0A0C4DH59 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC21.79■■□□□ 1.08
TRBV5-4A0A0C4DH59 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC21.79■■□□□ 1.08
TRBV5-4A0A0C4DH59 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
TRBV5-4A0A0C4DH59 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
TRBV5-4A0A0C4DH59 AC135279.3-201ENST00000610945 1311 ntBASIC21.79■■□□□ 1.08
TRBV5-4A0A0C4DH59 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC21.78■■□□□ 1.08
TRBV5-4A0A0C4DH59 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
TRBV5-4A0A0C4DH59 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TRBV5-4A0A0C4DH59 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
TRBV5-4A0A0C4DH59 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC21.78■■□□□ 1.08
TRBV5-4A0A0C4DH59 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC21.78■■□□□ 1.08
TRBV5-4A0A0C4DH59 MIR4767-201ENST00000582827 78 ntBASIC21.78■■□□□ 1.08
TRBV5-4A0A0C4DH59 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC21.78■■□□□ 1.08
TRBV5-4A0A0C4DH59 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TRBV5-4A0A0C4DH59 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TRBV5-4A0A0C4DH59 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC21.78■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms