Protein–RNA interactions for Protein: A0A0B4J275

TRAV17, T-cell receptor alpha variable 17 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV17A0A0B4J275 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TRAV17A0A0B4J275 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC20.11■□□□□ 0.81
TRAV17A0A0B4J275 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TRAV17A0A0B4J275 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TRAV17A0A0B4J275 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
TRAV17A0A0B4J275 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
TRAV17A0A0B4J275 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
TRAV17A0A0B4J275 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC20.11■□□□□ 0.81
TRAV17A0A0B4J275 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC20.11■□□□□ 0.81
TRAV17A0A0B4J275 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC20.11■□□□□ 0.81
TRAV17A0A0B4J275 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC20.11■□□□□ 0.81
TRAV17A0A0B4J275 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TRAV17A0A0B4J275 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
TRAV17A0A0B4J275 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
TRAV17A0A0B4J275 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
TRAV17A0A0B4J275 AC004687.1-201ENST00000579003 1625 ntBASIC20.1■□□□□ 0.81
TRAV17A0A0B4J275 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TRAV17A0A0B4J275 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
TRAV17A0A0B4J275 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TRAV17A0A0B4J275 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
TRAV17A0A0B4J275 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC20.1■□□□□ 0.81
TRAV17A0A0B4J275 AC004911.1-201ENST00000416316 871 ntBASIC20.1■□□□□ 0.81
TRAV17A0A0B4J275 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC20.1■□□□□ 0.81
TRAV17A0A0B4J275 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TRAV17A0A0B4J275 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC20.1■□□□□ 0.81
TRAV17A0A0B4J275 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
TRAV17A0A0B4J275 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC20.09■□□□□ 0.81
TRAV17A0A0B4J275 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC20.09■□□□□ 0.81
TRAV17A0A0B4J275 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
TRAV17A0A0B4J275 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TRAV17A0A0B4J275 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC20.09■□□□□ 0.81
TRAV17A0A0B4J275 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC20.09■□□□□ 0.81
TRAV17A0A0B4J275 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC20.09■□□□□ 0.81
TRAV17A0A0B4J275 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TRAV17A0A0B4J275 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TRAV17A0A0B4J275 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
TRAV17A0A0B4J275 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TRAV17A0A0B4J275 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TRAV17A0A0B4J275 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC20.09■□□□□ 0.81
TRAV17A0A0B4J275 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC20.09■□□□□ 0.81
TRAV17A0A0B4J275 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC20.09■□□□□ 0.81
TRAV17A0A0B4J275 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
TRAV17A0A0B4J275 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
TRAV17A0A0B4J275 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC20.09■□□□□ 0.81
TRAV17A0A0B4J275 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TRAV17A0A0B4J275 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TRAV17A0A0B4J275 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TRAV17A0A0B4J275 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
TRAV17A0A0B4J275 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TRAV17A0A0B4J275 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
TRAV17A0A0B4J275 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC20.08■□□□□ 0.81
TRAV17A0A0B4J275 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
TRAV17A0A0B4J275 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
TRAV17A0A0B4J275 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
TRAV17A0A0B4J275 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
TRAV17A0A0B4J275 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
TRAV17A0A0B4J275 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
TRAV17A0A0B4J275 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
TRAV17A0A0B4J275 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
TRAV17A0A0B4J275 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC20.08■□□□□ 0.81
TRAV17A0A0B4J275 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
TRAV17A0A0B4J275 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
TRAV17A0A0B4J275 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
TRAV17A0A0B4J275 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
TRAV17A0A0B4J275 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC20.08■□□□□ 0.8
TRAV17A0A0B4J275 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC20.07■□□□□ 0.8
TRAV17A0A0B4J275 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC20.07■□□□□ 0.8
TRAV17A0A0B4J275 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRAV17A0A0B4J275 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC20.07■□□□□ 0.8
TRAV17A0A0B4J275 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC20.07■□□□□ 0.8
TRAV17A0A0B4J275 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC20.07■□□□□ 0.8
TRAV17A0A0B4J275 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC20.07■□□□□ 0.8
TRAV17A0A0B4J275 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRAV17A0A0B4J275 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC20.07■□□□□ 0.8
TRAV17A0A0B4J275 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TRAV17A0A0B4J275 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
TRAV17A0A0B4J275 AL353803.4-201ENST00000565882 1934 ntBASIC20.06■□□□□ 0.8
TRAV17A0A0B4J275 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRAV17A0A0B4J275 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRAV17A0A0B4J275 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
TRAV17A0A0B4J275 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC20.06■□□□□ 0.8
TRAV17A0A0B4J275 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TRAV17A0A0B4J275 DLX3-202ENST00000512495 834 ntTSL 2 BASIC20.06■□□□□ 0.8
TRAV17A0A0B4J275 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC20.06■□□□□ 0.8
TRAV17A0A0B4J275 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRAV17A0A0B4J275 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC20.06■□□□□ 0.8
TRAV17A0A0B4J275 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC20.06■□□□□ 0.8
TRAV17A0A0B4J275 EI24-211ENST00000534546 1544 ntTSL 2 BASIC20.06■□□□□ 0.8
TRAV17A0A0B4J275 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
TRAV17A0A0B4J275 AC004812.2-201ENST00000611079 2094 ntBASIC20.06■□□□□ 0.8
TRAV17A0A0B4J275 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC20.05■□□□□ 0.8
TRAV17A0A0B4J275 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRAV17A0A0B4J275 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
TRAV17A0A0B4J275 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRAV17A0A0B4J275 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRAV17A0A0B4J275 AC010141.3-201ENST00000456659 717 ntBASIC20.05■□□□□ 0.8
TRAV17A0A0B4J275 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC20.05■□□□□ 0.8
TRAV17A0A0B4J275 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC20.05■□□□□ 0.8
TRAV17A0A0B4J275 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
TRAV17A0A0B4J275 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms