Protein–RNA interactions for Protein: A0A0B4J271

TRAV12-3, T-cell receptor alpha variable 12-3 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-3A0A0B4J271 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TRAV12-3A0A0B4J271 STK25-234ENST00000535007 2459 ntTSL 2 BASIC16.36■□□□□ 0.21
TRAV12-3A0A0B4J271 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRAV12-3A0A0B4J271 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRAV12-3A0A0B4J271 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRAV12-3A0A0B4J271 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
TRAV12-3A0A0B4J271 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
TRAV12-3A0A0B4J271 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRAV12-3A0A0B4J271 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRAV12-3A0A0B4J271 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC16.36■□□□□ 0.21
TRAV12-3A0A0B4J271 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TRAV12-3A0A0B4J271 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
TRAV12-3A0A0B4J271 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRAV12-3A0A0B4J271 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC16.36■□□□□ 0.21
TRAV12-3A0A0B4J271 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
TRAV12-3A0A0B4J271 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC16.36■□□□□ 0.21
TRAV12-3A0A0B4J271 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRAV12-3A0A0B4J271 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC16.35■□□□□ 0.21
TRAV12-3A0A0B4J271 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
TRAV12-3A0A0B4J271 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
TRAV12-3A0A0B4J271 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC16.35■□□□□ 0.21
TRAV12-3A0A0B4J271 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC16.35■□□□□ 0.21
TRAV12-3A0A0B4J271 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TRAV12-3A0A0B4J271 AC009299.2-201ENST00000482477 511 ntBASIC16.35■□□□□ 0.21
TRAV12-3A0A0B4J271 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TRAV12-3A0A0B4J271 LINC01529-204ENST00000636474 1715 ntBASIC16.35■□□□□ 0.21
TRAV12-3A0A0B4J271 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRAV12-3A0A0B4J271 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TRAV12-3A0A0B4J271 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRAV12-3A0A0B4J271 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRAV12-3A0A0B4J271 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRAV12-3A0A0B4J271 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC16.35■□□□□ 0.21
TRAV12-3A0A0B4J271 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRAV12-3A0A0B4J271 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC16.34■□□□□ 0.21
TRAV12-3A0A0B4J271 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRAV12-3A0A0B4J271 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRAV12-3A0A0B4J271 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TRAV12-3A0A0B4J271 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRAV12-3A0A0B4J271 CD72-202ENST00000378430 585 ntTSL 3 BASIC16.34■□□□□ 0.21
TRAV12-3A0A0B4J271 AC010997.5-201ENST00000609182 354 ntBASIC16.34■□□□□ 0.21
TRAV12-3A0A0B4J271 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRAV12-3A0A0B4J271 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRAV12-3A0A0B4J271 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRAV12-3A0A0B4J271 ESRRAP2-201ENST00000418437 1549 ntBASIC16.34■□□□□ 0.21
TRAV12-3A0A0B4J271 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRAV12-3A0A0B4J271 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRAV12-3A0A0B4J271 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRAV12-3A0A0B4J271 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
TRAV12-3A0A0B4J271 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC16.34■□□□□ 0.21
TRAV12-3A0A0B4J271 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
TRAV12-3A0A0B4J271 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
TRAV12-3A0A0B4J271 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
TRAV12-3A0A0B4J271 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
TRAV12-3A0A0B4J271 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TRAV12-3A0A0B4J271 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRAV12-3A0A0B4J271 HES6-204ENST00000409182 863 ntTSL 2 BASIC16.33■□□□□ 0.2
TRAV12-3A0A0B4J271 AL451085.2-201ENST00000605085 799 ntBASIC16.33■□□□□ 0.2
TRAV12-3A0A0B4J271 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TRAV12-3A0A0B4J271 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC16.33■□□□□ 0.2
TRAV12-3A0A0B4J271 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
TRAV12-3A0A0B4J271 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
TRAV12-3A0A0B4J271 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRAV12-3A0A0B4J271 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC16.33■□□□□ 0.2
TRAV12-3A0A0B4J271 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRAV12-3A0A0B4J271 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRAV12-3A0A0B4J271 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC16.33■□□□□ 0.2
TRAV12-3A0A0B4J271 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
TRAV12-3A0A0B4J271 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRAV12-3A0A0B4J271 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC16.32■□□□□ 0.2
TRAV12-3A0A0B4J271 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRAV12-3A0A0B4J271 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRAV12-3A0A0B4J271 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TRAV12-3A0A0B4J271 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
TRAV12-3A0A0B4J271 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC16.32■□□□□ 0.2
TRAV12-3A0A0B4J271 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TRAV12-3A0A0B4J271 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TRAV12-3A0A0B4J271 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRAV12-3A0A0B4J271 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRAV12-3A0A0B4J271 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC16.31■□□□□ 0.2
TRAV12-3A0A0B4J271 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRAV12-3A0A0B4J271 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC16.31■□□□□ 0.2
TRAV12-3A0A0B4J271 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
TRAV12-3A0A0B4J271 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
TRAV12-3A0A0B4J271 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC16.31■□□□□ 0.2
TRAV12-3A0A0B4J271 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRAV12-3A0A0B4J271 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRAV12-3A0A0B4J271 FP325331.1-202ENST00000623531 1380 ntBASIC16.31■□□□□ 0.2
TRAV12-3A0A0B4J271 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
TRAV12-3A0A0B4J271 ASB1-202ENST00000409297 878 ntTSL 5 BASIC16.31■□□□□ 0.2
TRAV12-3A0A0B4J271 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC16.31■□□□□ 0.2
TRAV12-3A0A0B4J271 EXOG-217ENST00000630638 197 ntTSL 5 BASIC16.31■□□□□ 0.2
TRAV12-3A0A0B4J271 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRAV12-3A0A0B4J271 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRAV12-3A0A0B4J271 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC16.31■□□□□ 0.2
TRAV12-3A0A0B4J271 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRAV12-3A0A0B4J271 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC16.31■□□□□ 0.2
TRAV12-3A0A0B4J271 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRAV12-3A0A0B4J271 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
TRAV12-3A0A0B4J271 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRAV12-3A0A0B4J271 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 15 ms