Protein–RNA interactions for Protein: A0A0B4J268

TRAV4, T-cell receptor alpha variable 4 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV4A0A0B4J268 MIR6724-2-201ENST00000616483 92 ntBASIC15.84■□□□□ 0.13
TRAV4A0A0B4J268 MIR6724-4-201ENST00000617390 92 ntBASIC15.84■□□□□ 0.13
TRAV4A0A0B4J268 MIR6724-3-201ENST00000622482 92 ntBASIC15.84■□□□□ 0.13
TRAV4A0A0B4J268 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC15.84■□□□□ 0.13
TRAV4A0A0B4J268 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC15.84■□□□□ 0.13
TRAV4A0A0B4J268 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
TRAV4A0A0B4J268 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
TRAV4A0A0B4J268 AC009102.2-201ENST00000606772 1639 ntBASIC15.83■□□□□ 0.13
TRAV4A0A0B4J268 RNF165-205ENST00000588679 2904 ntBASIC15.83■□□□□ 0.12
TRAV4A0A0B4J268 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRAV4A0A0B4J268 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRAV4A0A0B4J268 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRAV4A0A0B4J268 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TRAV4A0A0B4J268 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
TRAV4A0A0B4J268 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC15.83■□□□□ 0.12
TRAV4A0A0B4J268 CREM-229ENST00000474362 1030 ntTSL 2 BASIC15.83■□□□□ 0.12
TRAV4A0A0B4J268 DUX4L4-201ENST00000566884 1269 ntBASIC15.83■□□□□ 0.12
TRAV4A0A0B4J268 AC009086.3-201ENST00000623486 1008 ntBASIC15.83■□□□□ 0.12
TRAV4A0A0B4J268 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC15.83■□□□□ 0.12
TRAV4A0A0B4J268 AL117328.2-201ENST00000624617 1940 ntBASIC15.83■□□□□ 0.12
TRAV4A0A0B4J268 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
TRAV4A0A0B4J268 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC15.83■□□□□ 0.12
TRAV4A0A0B4J268 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRAV4A0A0B4J268 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
TRAV4A0A0B4J268 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAV4A0A0B4J268 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
TRAV4A0A0B4J268 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
TRAV4A0A0B4J268 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAV4A0A0B4J268 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAV4A0A0B4J268 ASB1-202ENST00000409297 878 ntTSL 5 BASIC15.82■□□□□ 0.12
TRAV4A0A0B4J268 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC15.82■□□□□ 0.12
TRAV4A0A0B4J268 AL035685.1-201ENST00000636663 812 ntBASIC15.82■□□□□ 0.12
TRAV4A0A0B4J268 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC15.82■□□□□ 0.12
TRAV4A0A0B4J268 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC15.82■□□□□ 0.12
TRAV4A0A0B4J268 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
TRAV4A0A0B4J268 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
TRAV4A0A0B4J268 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC15.82■□□□□ 0.12
TRAV4A0A0B4J268 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAV4A0A0B4J268 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
TRAV4A0A0B4J268 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAV4A0A0B4J268 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC15.82■□□□□ 0.12
TRAV4A0A0B4J268 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
TRAV4A0A0B4J268 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRAV4A0A0B4J268 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRAV4A0A0B4J268 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TRAV4A0A0B4J268 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRAV4A0A0B4J268 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TRAV4A0A0B4J268 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRAV4A0A0B4J268 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TRAV4A0A0B4J268 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRAV4A0A0B4J268 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRAV4A0A0B4J268 COMT-203ENST00000403184 2217 ntTSL 2 BASIC15.81■□□□□ 0.12
TRAV4A0A0B4J268 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRAV4A0A0B4J268 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
TRAV4A0A0B4J268 OR2A1-AS1-204ENST00000470435 602 ntBASIC15.81■□□□□ 0.12
TRAV4A0A0B4J268 UNC93B8-201ENST00000511903 705 ntBASIC15.81■□□□□ 0.12
TRAV4A0A0B4J268 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC15.81■□□□□ 0.12
TRAV4A0A0B4J268 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TRAV4A0A0B4J268 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRAV4A0A0B4J268 NKILA-201ENST00000613231 537 ntTSL 4 BASIC15.81■□□□□ 0.12
TRAV4A0A0B4J268 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRAV4A0A0B4J268 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRAV4A0A0B4J268 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRAV4A0A0B4J268 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
TRAV4A0A0B4J268 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC15.8■□□□□ 0.12
TRAV4A0A0B4J268 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV4A0A0B4J268 AL121603.2-201ENST00000557373 2117 ntBASIC15.8■□□□□ 0.12
TRAV4A0A0B4J268 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
TRAV4A0A0B4J268 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV4A0A0B4J268 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV4A0A0B4J268 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
TRAV4A0A0B4J268 USP48-205ENST00000421625 2818 ntTSL 2 BASIC15.8■□□□□ 0.12
TRAV4A0A0B4J268 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
TRAV4A0A0B4J268 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC15.8■□□□□ 0.12
TRAV4A0A0B4J268 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV4A0A0B4J268 KRT16P3-201ENST00000439127 1283 ntBASIC15.8■□□□□ 0.12
TRAV4A0A0B4J268 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV4A0A0B4J268 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV4A0A0B4J268 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV4A0A0B4J268 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV4A0A0B4J268 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV4A0A0B4J268 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
TRAV4A0A0B4J268 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC15.8■□□□□ 0.12
TRAV4A0A0B4J268 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
TRAV4A0A0B4J268 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
TRAV4A0A0B4J268 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV4A0A0B4J268 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
TRAV4A0A0B4J268 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV4A0A0B4J268 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV4A0A0B4J268 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV4A0A0B4J268 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV4A0A0B4J268 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV4A0A0B4J268 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV4A0A0B4J268 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
TRAV4A0A0B4J268 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV4A0A0B4J268 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV4A0A0B4J268 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC15.79■□□□□ 0.12
TRAV4A0A0B4J268 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC15.79■□□□□ 0.12
TRAV4A0A0B4J268 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV4A0A0B4J268 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms