Protein–RNA interactions for Protein: A0A087WT02

TRAV9-2, T-cell receptor alpha variable 9-2 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV9-2A0A087WT02 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRAV9-2A0A087WT02 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
TRAV9-2A0A087WT02 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRAV9-2A0A087WT02 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRAV9-2A0A087WT02 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
TRAV9-2A0A087WT02 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
TRAV9-2A0A087WT02 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
TRAV9-2A0A087WT02 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
TRAV9-2A0A087WT02 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
TRAV9-2A0A087WT02 MTX2-204ENST00000443241 799 ntTSL 3 BASIC16.32■□□□□ 0.2
TRAV9-2A0A087WT02 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC16.32■□□□□ 0.2
TRAV9-2A0A087WT02 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
TRAV9-2A0A087WT02 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC16.32■□□□□ 0.2
TRAV9-2A0A087WT02 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TRAV9-2A0A087WT02 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
TRAV9-2A0A087WT02 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC16.32■□□□□ 0.2
TRAV9-2A0A087WT02 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
TRAV9-2A0A087WT02 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRAV9-2A0A087WT02 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRAV9-2A0A087WT02 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC16.31■□□□□ 0.2
TRAV9-2A0A087WT02 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRAV9-2A0A087WT02 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRAV9-2A0A087WT02 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
TRAV9-2A0A087WT02 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRAV9-2A0A087WT02 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC16.31■□□□□ 0.2
TRAV9-2A0A087WT02 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC16.31■□□□□ 0.2
TRAV9-2A0A087WT02 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC16.31■□□□□ 0.2
TRAV9-2A0A087WT02 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRAV9-2A0A087WT02 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRAV9-2A0A087WT02 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRAV9-2A0A087WT02 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRAV9-2A0A087WT02 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TRAV9-2A0A087WT02 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC16.31■□□□□ 0.2
TRAV9-2A0A087WT02 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRAV9-2A0A087WT02 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TRAV9-2A0A087WT02 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRAV9-2A0A087WT02 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC16.3■□□□□ 0.2
TRAV9-2A0A087WT02 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TRAV9-2A0A087WT02 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRAV9-2A0A087WT02 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRAV9-2A0A087WT02 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRAV9-2A0A087WT02 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TRAV9-2A0A087WT02 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRAV9-2A0A087WT02 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
TRAV9-2A0A087WT02 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TRAV9-2A0A087WT02 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRAV9-2A0A087WT02 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC16.3■□□□□ 0.2
TRAV9-2A0A087WT02 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
TRAV9-2A0A087WT02 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC16.3■□□□□ 0.2
TRAV9-2A0A087WT02 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
TRAV9-2A0A087WT02 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRAV9-2A0A087WT02 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRAV9-2A0A087WT02 LSR-205ENST00000427250 1606 ntTSL 2 BASIC16.3■□□□□ 0.2
TRAV9-2A0A087WT02 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TRAV9-2A0A087WT02 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRAV9-2A0A087WT02 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRAV9-2A0A087WT02 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC16.29■□□□□ 0.2
TRAV9-2A0A087WT02 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TRAV9-2A0A087WT02 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC16.29■□□□□ 0.2
TRAV9-2A0A087WT02 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC16.29■□□□□ 0.2
TRAV9-2A0A087WT02 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRAV9-2A0A087WT02 RPS2P7-201ENST00000447334 885 ntBASIC16.29■□□□□ 0.2
TRAV9-2A0A087WT02 SPCS2P3-201ENST00000500401 656 ntBASIC16.29■□□□□ 0.2
TRAV9-2A0A087WT02 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC16.29■□□□□ 0.2
TRAV9-2A0A087WT02 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
TRAV9-2A0A087WT02 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TRAV9-2A0A087WT02 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
TRAV9-2A0A087WT02 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRAV9-2A0A087WT02 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
TRAV9-2A0A087WT02 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
TRAV9-2A0A087WT02 ESRRAP2-201ENST00000418437 1549 ntBASIC16.29■□□□□ 0.2
TRAV9-2A0A087WT02 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
TRAV9-2A0A087WT02 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRAV9-2A0A087WT02 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRAV9-2A0A087WT02 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
TRAV9-2A0A087WT02 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRAV9-2A0A087WT02 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRAV9-2A0A087WT02 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRAV9-2A0A087WT02 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRAV9-2A0A087WT02 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRAV9-2A0A087WT02 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRAV9-2A0A087WT02 YBX1P4-201ENST00000392794 808 ntBASIC16.28■□□□□ 0.2
TRAV9-2A0A087WT02 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRAV9-2A0A087WT02 AC087393.1-201ENST00000582896 145 ntBASIC16.28■□□□□ 0.2
TRAV9-2A0A087WT02 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TRAV9-2A0A087WT02 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRAV9-2A0A087WT02 RARG-204ENST00000543726 1779 ntTSL 2 BASIC16.28■□□□□ 0.2
TRAV9-2A0A087WT02 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRAV9-2A0A087WT02 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRAV9-2A0A087WT02 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
TRAV9-2A0A087WT02 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC16.27■□□□□ 0.2
TRAV9-2A0A087WT02 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TRAV9-2A0A087WT02 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC16.27■□□□□ 0.2
TRAV9-2A0A087WT02 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRAV9-2A0A087WT02 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC16.27■□□□□ 0.2
TRAV9-2A0A087WT02 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TRAV9-2A0A087WT02 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
TRAV9-2A0A087WT02 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRAV9-2A0A087WT02 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRAV9-2A0A087WT02 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms