Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 HK3-201ENST00000292432 3066 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
VPS13DQ5THJ4 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC8.4□□□□□ -1.06
VPS13DQ5THJ4 HNRNPMP1-201ENST00000560685 1768 ntBASIC8.4□□□□□ -1.06
VPS13DQ5THJ4 IGLV1-40-201ENST00000390299 407 ntAPPRIS P1 BASIC8.4□□□□□ -1.06
VPS13DQ5THJ4 RPL17P34-201ENST00000394133 555 ntBASIC8.4□□□□□ -1.06
VPS13DQ5THJ4 ALDOAP2-201ENST00000398050 1076 ntBASIC8.4□□□□□ -1.06
VPS13DQ5THJ4 MYL5-201ENST00000400159 666 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
VPS13DQ5THJ4 KLF7-209ENST00000458272 539 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
VPS13DQ5THJ4 AC073592.1-201ENST00000543970 1282 ntTSL 3 BASIC8.4□□□□□ -1.06
VPS13DQ5THJ4 MEG8_1.1-201ENST00000617245 97 ntBASIC8.4□□□□□ -1.06
VPS13DQ5THJ4 AC011591.2-201ENST00000636637 786 ntBASIC8.4□□□□□ -1.06
VPS13DQ5THJ4 KIR2DP1-201ENST00000415311 1331 ntBASIC8.4□□□□□ -1.06
VPS13DQ5THJ4 AL157838.1-201ENST00000424252 2502 ntTSL 2 BASIC8.4□□□□□ -1.06
VPS13DQ5THJ4 CLEC4F-202ENST00000426626 2012 ntAPPRIS ALT2 TSL 1 (best) BASIC8.4□□□□□ -1.06
VPS13DQ5THJ4 ELOVL1-216ENST00000621943 1625 ntAPPRIS P1 TSL 2 BASIC8.4□□□□□ -1.06
VPS13DQ5THJ4 NOXRED1-201ENST00000380835 1857 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
VPS13DQ5THJ4 MAPT-202ENST00000334239 1107 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
VPS13DQ5THJ4 GAPDHP67-201ENST00000422905 788 ntBASIC8.4□□□□□ -1.06
VPS13DQ5THJ4 FCGR2C-202ENST00000466542 1070 ntAPPRIS P5 TSL 1 (best) BASIC8.4□□□□□ -1.06
VPS13DQ5THJ4 JPT1-208ENST00000481647 576 ntTSL 5 BASIC8.4□□□□□ -1.06
VPS13DQ5THJ4 AC138781.1-201ENST00000501322 505 ntTSL 3 BASIC8.4□□□□□ -1.06
VPS13DQ5THJ4 MIR6131-201ENST00000611729 109 ntBASIC8.4□□□□□ -1.06
VPS13DQ5THJ4 PTPRT-212ENST00000620410 940 ntTSL 5 BASIC8.4□□□□□ -1.06
VPS13DQ5THJ4 AC004494.2-201ENST00000623168 830 ntBASIC8.4□□□□□ -1.06
VPS13DQ5THJ4 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
VPS13DQ5THJ4 WDR60-202ENST00000407559 3769 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
VPS13DQ5THJ4 CEP57L1-204ENST00000407272 1947 ntTSL 5 BASIC8.4□□□□□ -1.06
VPS13DQ5THJ4 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC8.4□□□□□ -1.06
VPS13DQ5THJ4 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC8.4□□□□□ -1.06
VPS13DQ5THJ4 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC8.4□□□□□ -1.06
VPS13DQ5THJ4 EFHC1-224ENST00000636702 2197 ntTSL 5 BASIC8.4□□□□□ -1.06
VPS13DQ5THJ4 SUPT7L-203ENST00000405491 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC8.4□□□□□ -1.06
VPS13DQ5THJ4 LYPD5-201ENST00000377950 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC8.4□□□□□ -1.06
VPS13DQ5THJ4 NEDD1-202ENST00000411739 2490 ntTSL 2 BASIC8.4□□□□□ -1.06
VPS13DQ5THJ4 PICART1-201ENST00000499842 2533 ntTSL 2 BASIC8.4□□□□□ -1.06
VPS13DQ5THJ4 GTF2F1-201ENST00000394456 2731 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
VPS13DQ5THJ4 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC8.4□□□□□ -1.06
VPS13DQ5THJ4 ATP6V1G2-206ENST00000376151 1261 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
VPS13DQ5THJ4 STYXL1-206ENST00000431581 1147 ntAPPRIS P1 TSL 5 BASIC8.4□□□□□ -1.06
VPS13DQ5THJ4 LINC01366-201ENST00000436248 983 ntTSL 3 BASIC8.4□□□□□ -1.06
VPS13DQ5THJ4 AC008940.1-201ENST00000438117 785 ntTSL 5 BASIC8.4□□□□□ -1.06
VPS13DQ5THJ4 IFNWP19-201ENST00000438727 566 ntBASIC8.4□□□□□ -1.06
VPS13DQ5THJ4 AC091057.1-201ENST00000501830 970 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
VPS13DQ5THJ4 SDHD-204ENST00000528021 1071 ntTSL 3 BASIC8.4□□□□□ -1.06
VPS13DQ5THJ4 SDHD-205ENST00000528048 905 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
VPS13DQ5THJ4 LINC02450-201ENST00000550177 1003 ntTSL 2 BASIC8.4□□□□□ -1.06
VPS13DQ5THJ4 AC110285.1-201ENST00000572077 665 ntTSL 3 BASIC8.4□□□□□ -1.06
VPS13DQ5THJ4 SIGLEC17P-201ENST00000593736 484 ntBASIC8.4□□□□□ -1.06
VPS13DQ5THJ4 AC013403.2-201ENST00000607659 480 ntBASIC8.4□□□□□ -1.06
VPS13DQ5THJ4 PIMREG-206ENST00000572595 1551 ntTSL 3 BASIC8.4□□□□□ -1.06
VPS13DQ5THJ4 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC8.4□□□□□ -1.07
VPS13DQ5THJ4 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
VPS13DQ5THJ4 LRRC27-202ENST00000368612 1765 ntTSL 2 BASIC8.4□□□□□ -1.07
VPS13DQ5THJ4 XBP1-204ENST00000405219 1690 ntTSL 2 BASIC8.4□□□□□ -1.07
VPS13DQ5THJ4 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC8.4□□□□□ -1.07
VPS13DQ5THJ4 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC8.4□□□□□ -1.07
VPS13DQ5THJ4 CCDC89-201ENST00000316398 1412 ntAPPRIS P1 BASIC8.4□□□□□ -1.07
VPS13DQ5THJ4 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC8.4□□□□□ -1.07
VPS13DQ5THJ4 LINC01515-201ENST00000433152 1339 ntTSL 5 BASIC8.4□□□□□ -1.07
VPS13DQ5THJ4 C10orf99-201ENST00000372126 888 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
VPS13DQ5THJ4 IGKV2D-26-201ENST00000390268 390 ntAPPRIS P1 BASIC8.4□□□□□ -1.07
VPS13DQ5THJ4 ACTR3-202ENST00000415792 676 ntTSL 3 BASIC8.4□□□□□ -1.07
VPS13DQ5THJ4 AL355802.1-201ENST00000417591 990 ntTSL 3 BASIC8.4□□□□□ -1.07
VPS13DQ5THJ4 AC104333.3-201ENST00000449334 479 ntBASIC8.4□□□□□ -1.07
VPS13DQ5THJ4 ARL1-209ENST00000551671 879 ntTSL 2 BASIC8.4□□□□□ -1.07
VPS13DQ5THJ4 C12orf80-202ENST00000551894 1257 ntTSL 1 (best) BASIC8.4□□□□□ -1.07
VPS13DQ5THJ4 MIR4689-201ENST00000582517 70 ntBASIC8.4□□□□□ -1.07
VPS13DQ5THJ4 LINC01828-205ENST00000594329 863 ntTSL 5 BASIC8.4□□□□□ -1.07
VPS13DQ5THJ4 AL157392.3-201ENST00000601075 833 ntTSL 5 BASIC8.4□□□□□ -1.07
VPS13DQ5THJ4 AC072062.1-201ENST00000617699 351 ntTSL 5 BASIC8.4□□□□□ -1.07
VPS13DQ5THJ4 DNAJB8-202ENST00000469083 3365 ntAPPRIS P1 TSL 2 BASIC8.4□□□□□ -1.07
VPS13DQ5THJ4 PAX3-205ENST00000392069 3170 ntTSL 5 BASIC8.4□□□□□ -1.07
VPS13DQ5THJ4 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC8.4□□□□□ -1.07
VPS13DQ5THJ4 Z97192.2-201ENST00000393264 2379 ntTSL 2 BASIC8.4□□□□□ -1.07
VPS13DQ5THJ4 SLC23A1-202ENST00000353963 2303 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
VPS13DQ5THJ4 HTR3A-201ENST00000299961 1994 ntTSL 2 BASIC8.39□□□□□ -1.07
VPS13DQ5THJ4 IQCD-202ENST00000416617 1673 ntAPPRIS ALT2 TSL 5 BASIC8.39□□□□□ -1.07
VPS13DQ5THJ4 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC8.39□□□□□ -1.07
VPS13DQ5THJ4 LINC01686-201ENST00000566297 1376 ntBASIC8.39□□□□□ -1.07
VPS13DQ5THJ4 CFAP206-202ENST00000369562 2196 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
VPS13DQ5THJ4 IDO2-202ENST00000389060 1227 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
VPS13DQ5THJ4 HNRNPA3P3-201ENST00000416838 1137 ntBASIC8.39□□□□□ -1.07
VPS13DQ5THJ4 ATP6AP1L-202ENST00000439350 758 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
VPS13DQ5THJ4 BX284656.1-201ENST00000446364 668 ntTSL 3 BASIC8.39□□□□□ -1.07
VPS13DQ5THJ4 AL589743.2-201ENST00000547821 602 ntBASIC8.39□□□□□ -1.07
VPS13DQ5THJ4 NT5CP2-201ENST00000553305 561 ntBASIC8.39□□□□□ -1.07
VPS13DQ5THJ4 ZNF548-207ENST00000597400 589 ntTSL 3 BASIC8.39□□□□□ -1.07
VPS13DQ5THJ4 ETV7-208ENST00000627426 1285 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
VPS13DQ5THJ4 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC8.39□□□□□ -1.07
VPS13DQ5THJ4 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC8.39□□□□□ -1.07
VPS13DQ5THJ4 SPP1-203ENST00000395080 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
VPS13DQ5THJ4 TMEM136-201ENST00000314475 1434 ntTSL 2 BASIC8.39□□□□□ -1.07
VPS13DQ5THJ4 SRSF1-205ENST00000582730 3117 ntTSL 2 BASIC8.39□□□□□ -1.07
VPS13DQ5THJ4 FOSB-212ENST00000592811 3089 ntTSL 2 BASIC8.39□□□□□ -1.07
VPS13DQ5THJ4 MUC20-203ENST00000436408 2463 ntAPPRIS ALT2 TSL 5 BASIC8.39□□□□□ -1.07
VPS13DQ5THJ4 CA6-203ENST00000377443 1319 ntAPPRIS P3 TSL 1 (best) BASIC8.39□□□□□ -1.07
VPS13DQ5THJ4 GSTM4-202ENST00000336075 657 ntAPPRIS ALT1 TSL 1 (best) BASIC8.39□□□□□ -1.07
VPS13DQ5THJ4 TRAF3IP2-206ENST00000368735 903 ntTSL 2 BASIC8.39□□□□□ -1.07
VPS13DQ5THJ4 SMIM11A-201ENST00000399292 850 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
VPS13DQ5THJ4 LINC02054-201ENST00000419960 885 ntTSL 3 BASIC8.39□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms