Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC14.23□□□□□ -0.13
SSR1P43307 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SSR1P43307 OR2V1-201ENST00000329365 948 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
SSR1P43307 CSAG1-203ENST00000370291 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
SSR1P43307 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SSR1P43307 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC14.23□□□□□ -0.13
SSR1P43307 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SSR1P43307 RGS5-216ENST00000449680 788 ntTSL 3 BASIC14.23□□□□□ -0.13
SSR1P43307 CSAG1-204ENST00000452779 627 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
SSR1P43307 BUD31-205ENST00000456893 512 ntTSL 5 BASIC14.23□□□□□ -0.13
SSR1P43307 SUPT4H1P2-201ENST00000501248 353 ntBASIC14.23□□□□□ -0.13
SSR1P43307 AC100858.1-201ENST00000514059 1228 ntBASIC14.23□□□□□ -0.13
SSR1P43307 POLD4-206ENST00000530584 899 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SSR1P43307 POLD4-208ENST00000532830 904 ntTSL 3 BASIC14.23□□□□□ -0.13
SSR1P43307 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
SSR1P43307 SNORD3B-1-201ENST00000577988 758 ntBASIC14.23□□□□□ -0.13
SSR1P43307 MBP-238ENST00000580402 915 ntTSL 5 BASIC14.23□□□□□ -0.13
SSR1P43307 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC14.23□□□□□ -0.13
SSR1P43307 ARFIP2-210ENST00000614314 3846 ntTSL 2 BASIC14.23□□□□□ -0.13
SSR1P43307 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC14.23□□□□□ -0.13
SSR1P43307 STAG3L1-204ENST00000619870 1192 ntTSL 2 BASIC14.23□□□□□ -0.13
SSR1P43307 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC14.23□□□□□ -0.13
SSR1P43307 SUN2-202ENST00000405510 4055 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SSR1P43307 SELENBP1-208ENST00000447402 1530 ntTSL 2 BASIC14.23□□□□□ -0.13
SSR1P43307 NDRG2-201ENST00000298684 1784 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SSR1P43307 PRR3-201ENST00000376557 1797 ntTSL 2 BASIC14.23□□□□□ -0.13
SSR1P43307 HSD3B2-206ENST00000543831 1783 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
SSR1P43307 HACD3-201ENST00000261875 3228 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SSR1P43307 ZNF287-202ENST00000395825 3208 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SSR1P43307 MAGED4-201ENST00000375626 2495 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SSR1P43307 ELP4-203ENST00000395934 1961 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SSR1P43307 KRT26-201ENST00000335552 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SSR1P43307 FARP1-201ENST00000319562 10262 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SSR1P43307 GRM2-202ENST00000395052 3151 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
SSR1P43307 PCDHGB2-201ENST00000522605 4602 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SSR1P43307 ATP8A1-202ENST00000381668 8270 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SSR1P43307 PPT1-204ENST00000439754 2195 ntTSL 3 BASIC14.23□□□□□ -0.13
SSR1P43307 HPX-201ENST00000265983 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SSR1P43307 APOL2-203ENST00000451256 1421 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
SSR1P43307 POLR1B-216ENST00000537335 4961 ntTSL 2 BASIC14.23□□□□□ -0.13
SSR1P43307 RHBDL2-201ENST00000289248 2129 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
SSR1P43307 HDAC7-203ENST00000380610 3261 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
SSR1P43307 GJB5-201ENST00000338513 1355 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SSR1P43307 FTX-216ENST00000638985 1367 ntTSL 5 BASIC14.22□□□□□ -0.13
SSR1P43307 SLFNL1-202ENST00000359345 4310 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
SSR1P43307 MTMR3-202ENST00000333027 8906 ntTSL 5 BASIC14.22□□□□□ -0.13
SSR1P43307 MYO1D-206ENST00000579584 3500 ntTSL 2 BASIC14.22□□□□□ -0.13
SSR1P43307 HK3-201ENST00000292432 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SSR1P43307 SPINT1-201ENST00000344051 3056 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
SSR1P43307 CPNE1-201ENST00000317677 1961 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SSR1P43307 GFI1B-203ENST00000372123 1514 ntTSL 5 BASIC14.22□□□□□ -0.13
SSR1P43307 FOXJ3-201ENST00000361346 5225 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
SSR1P43307 NOA1-201ENST00000264230 3415 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SSR1P43307 AC104590.1-202ENST00000558368 1921 ntBASIC14.22□□□□□ -0.13
SSR1P43307 SNX22-201ENST00000325881 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SSR1P43307 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SSR1P43307 TRMT1-202ENST00000357720 2142 ntAPPRIS P3 TSL 2 BASIC14.22□□□□□ -0.13
SSR1P43307 PCLAF-202ENST00000380258 911 ntTSL 2 BASIC14.22□□□□□ -0.13
SSR1P43307 TRBV7-3-201ENST00000390361 397 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
SSR1P43307 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SSR1P43307 GYPC-203ENST00000409836 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
SSR1P43307 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC14.22□□□□□ -0.13
SSR1P43307 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC14.22□□□□□ -0.13
SSR1P43307 AL121656.1-201ENST00000440786 482 ntTSL 5 BASIC14.22□□□□□ -0.13
SSR1P43307 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC14.22□□□□□ -0.13
SSR1P43307 AC084030.1-201ENST00000455068 561 ntTSL 4 BASIC14.22□□□□□ -0.13
SSR1P43307 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC14.22□□□□□ -0.13
SSR1P43307 FAM3D-AS1-201ENST00000464125 821 ntTSL 3 BASIC14.22□□□□□ -0.13
SSR1P43307 AADACL2-AS1-202ENST00000483843 628 ntTSL 5 BASIC14.22□□□□□ -0.13
SSR1P43307 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC14.22□□□□□ -0.13
SSR1P43307 AL132994.1-201ENST00000554098 400 ntBASIC14.22□□□□□ -0.13
SSR1P43307 SRRM2-205ENST00000570971 1132 ntTSL 2 BASIC14.22□□□□□ -0.13
SSR1P43307 AC068675.1-201ENST00000588996 561 ntTSL 4 BASIC14.22□□□□□ -0.13
SSR1P43307 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC14.22□□□□□ -0.13
SSR1P43307 AC008132.1-203ENST00000412938 5920 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SSR1P43307 DNMT3B-206ENST00000456297 2315 ntTSL 2 BASIC14.22□□□□□ -0.13
SSR1P43307 MAST4-202ENST00000403625 10711 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
SSR1P43307 LMBR1L-201ENST00000267102 2934 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SSR1P43307 PNPLA6-220ENST00000600737 4195 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SSR1P43307 SIRT2-201ENST00000249396 2070 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
SSR1P43307 SIRT2-204ENST00000392081 2062 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SSR1P43307 DRAM1-201ENST00000258534 3519 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SSR1P43307 GGA3-214ENST00000582717 2255 ntTSL 2 BASIC14.22□□□□□ -0.13
SSR1P43307 ETNK1-201ENST00000266517 7159 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SSR1P43307 KCNMA1-265ENST00000639591 3888 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
SSR1P43307 LINC00563-201ENST00000566370 1400 ntBASIC14.22□□□□□ -0.13
SSR1P43307 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC14.22□□□□□ -0.13
SSR1P43307 STAMBP-204ENST00000409707 1649 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
SSR1P43307 CASP8-212ENST00000432109 1629 ntAPPRIS P4 TSL 5 BASIC14.22□□□□□ -0.13
SSR1P43307 ANKRD20A7P-201ENST00000402318 2414 ntBASIC14.22□□□□□ -0.13
SSR1P43307 RAB37-204ENST00000392613 2617 ntAPPRIS ALT1 TSL 2 BASIC14.22□□□□□ -0.13
SSR1P43307 AJ239328.1-201ENST00000626237 4807 ntTSL 5 BASIC14.22□□□□□ -0.13
SSR1P43307 CCDC144A-204ENST00000360524 5830 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
SSR1P43307 RAB43-205ENST00000393308 4193 ntAPPRIS P1 TSL 4 BASIC14.22□□□□□ -0.13
SSR1P43307 WDR46-231ENST00000374617 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SSR1P43307 Z97192.2-201ENST00000393264 2379 ntTSL 2 BASIC14.22□□□□□ -0.13
SSR1P43307 AL031432.4-201ENST00000641729 2190 ntBASIC14.22□□□□□ -0.13
SSR1P43307 AC005154.3-201ENST00000419639 1393 ntBASIC14.22□□□□□ -0.13
SSR1P43307 AC090502.4-201ENST00000551714 1386 ntBASIC14.22□□□□□ -0.13
SSR1P43307 STX16-202ENST00000355957 4897 ntTSL 2 BASIC14.21□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms