Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 UCP2-202ENST00000536983 1413 ntTSL 5 BASIC14.08□□□□□ -0.15
LMO3Q8TAP4 ALPP-201ENST00000392027 2971 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LMO3Q8TAP4 AL162615.1-201ENST00000429893 1653 ntBASIC14.08□□□□□ -0.16
LMO3Q8TAP4 YWHAB-201ENST00000353703 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LMO3Q8TAP4 HRC-201ENST00000252825 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LMO3Q8TAP4 LINC01134-202ENST00000439488 1940 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
LMO3Q8TAP4 PLK4-210ENST00000514379 3060 ntTSL 2 BASIC14.08□□□□□ -0.16
LMO3Q8TAP4 MAGEB1-202ENST00000397548 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LMO3Q8TAP4 OPLAH-204ENST00000618853 4031 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LMO3Q8TAP4 OR2A25-203ENST00000641663 1741 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
LMO3Q8TAP4 HSD3BP1-201ENST00000286193 1111 ntBASIC14.08□□□□□ -0.16
LMO3Q8TAP4 RGR-203ENST00000372092 868 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
LMO3Q8TAP4 CCL19-202ENST00000378800 414 ntTSL 2 BASIC14.08□□□□□ -0.16
LMO3Q8TAP4 OR10N1P-201ENST00000392758 869 ntBASIC14.08□□□□□ -0.16
LMO3Q8TAP4 AL158207.2-201ENST00000414926 266 ntTSL 5 BASIC14.08□□□□□ -0.16
LMO3Q8TAP4 OR7E37P-201ENST00000421076 897 ntBASIC14.08□□□□□ -0.16
LMO3Q8TAP4 EMP1-203ENST00000431267 1039 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
LMO3Q8TAP4 AL157392.3-204ENST00000440878 397 ntTSL 3 BASIC14.08□□□□□ -0.16
LMO3Q8TAP4 RN7SL494P-201ENST00000461517 304 ntBASIC14.08□□□□□ -0.16
LMO3Q8TAP4 AC026410.1-201ENST00000507366 1101 ntBASIC14.08□□□□□ -0.16
LMO3Q8TAP4 AC113391.2-201ENST00000512245 553 ntTSL 4 BASIC14.08□□□□□ -0.16
LMO3Q8TAP4 CTBP2P4-201ENST00000513884 920 ntBASIC14.08□□□□□ -0.16
LMO3Q8TAP4 AC078878.2-201ENST00000543451 286 ntTSL 5 BASIC14.08□□□□□ -0.16
LMO3Q8TAP4 TSHZ3-202ENST00000558569 441 ntTSL 2 BASIC14.08□□□□□ -0.16
LMO3Q8TAP4 CYP4F36P-201ENST00000589193 186 ntBASIC14.08□□□□□ -0.16
LMO3Q8TAP4 APOC4-202ENST00000592954 615 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LMO3Q8TAP4 CPNE1-201ENST00000317677 1961 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
LMO3Q8TAP4 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LMO3Q8TAP4 AC004471.2-201ENST00000609936 1514 ntTSL 3 BASIC14.08□□□□□ -0.16
LMO3Q8TAP4 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
LMO3Q8TAP4 SPAG8-201ENST00000340291 1759 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
LMO3Q8TAP4 AC090136.3-201ENST00000520834 2704 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
LMO3Q8TAP4 CELF2-216ENST00000637215 2724 ntTSL 5 BASIC14.08□□□□□ -0.16
LMO3Q8TAP4 CCT8-201ENST00000286788 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LMO3Q8TAP4 EXOC7-207ENST00000411744 2031 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LMO3Q8TAP4 OR13A1-202ENST00000536058 2023 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
LMO3Q8TAP4 PTK2-202ENST00000395218 4415 ntTSL 5 BASIC14.08□□□□□ -0.16
LMO3Q8TAP4 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LMO3Q8TAP4 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
LMO3Q8TAP4 STRADA-202ENST00000336174 2255 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
LMO3Q8TAP4 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LMO3Q8TAP4 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC14.08□□□□□ -0.16
LMO3Q8TAP4 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
LMO3Q8TAP4 TACC1-209ENST00000520611 1550 ntTSL 2 BASIC14.08□□□□□ -0.16
LMO3Q8TAP4 AC092028.1-202ENST00000641483 3547 ntBASIC14.08□□□□□ -0.16
LMO3Q8TAP4 AC092028.1-201ENST00000641781 3540 ntBASIC14.08□□□□□ -0.16
LMO3Q8TAP4 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LMO3Q8TAP4 SPINT1-201ENST00000344051 3056 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
LMO3Q8TAP4 ABCB9-211ENST00000540285 3330 ntTSL 2 BASIC14.08□□□□□ -0.16
LMO3Q8TAP4 PI4KB-203ENST00000368874 3934 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LMO3Q8TAP4 DNMT3B-205ENST00000443239 2674 ntTSL 2 BASIC14.08□□□□□ -0.16
LMO3Q8TAP4 CAST-223ENST00000508608 2425 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
LMO3Q8TAP4 AC010182.1-201ENST00000548943 2434 ntBASIC14.07□□□□□ -0.16
LMO3Q8TAP4 SLC22A6-202ENST00000377871 2151 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
LMO3Q8TAP4 CHST4-202ENST00000539698 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LMO3Q8TAP4 CDC45-202ENST00000404724 1693 ntTSL 2 BASIC14.07□□□□□ -0.16
LMO3Q8TAP4 PIGB-202ENST00000539642 1668 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
LMO3Q8TAP4 ACR-201ENST00000216139 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LMO3Q8TAP4 CD33-201ENST00000262262 1444 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
LMO3Q8TAP4 FAM131B-204ENST00000409578 4286 ntTSL 5 BASIC14.07□□□□□ -0.16
LMO3Q8TAP4 MKRN2-202ENST00000411987 1436 ntTSL 2 BASIC14.07□□□□□ -0.16
LMO3Q8TAP4 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
LMO3Q8TAP4 BTNL8-201ENST00000231229 2229 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
LMO3Q8TAP4 TSGA10-201ENST00000355053 3037 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
LMO3Q8TAP4 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LMO3Q8TAP4 GSE1-203ENST00000405402 4366 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
LMO3Q8TAP4 ELP4-202ENST00000379163 1700 ntTSL 2 BASIC14.07□□□□□ -0.16
LMO3Q8TAP4 SP140L-205ENST00000458341 1727 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
LMO3Q8TAP4 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
LMO3Q8TAP4 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
LMO3Q8TAP4 ZMPSTE24-201ENST00000372759 3108 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LMO3Q8TAP4 MVP-201ENST00000357402 2870 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LMO3Q8TAP4 KRT40-201ENST00000377755 1812 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LMO3Q8TAP4 AC068075.1-201ENST00000519714 1832 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
LMO3Q8TAP4 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
LMO3Q8TAP4 MRPL33-201ENST00000296102 518 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LMO3Q8TAP4 ITGB2-201ENST00000302347 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LMO3Q8TAP4 HFE-203ENST00000336625 804 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
LMO3Q8TAP4 HIST1H4B-201ENST00000377745 438 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
LMO3Q8TAP4 MRPL33-202ENST00000379666 404 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
LMO3Q8TAP4 GEMIN8P4-201ENST00000380526 729 ntBASIC14.07□□□□□ -0.16
LMO3Q8TAP4 IGHV3-49-201ENST00000390625 439 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
LMO3Q8TAP4 AL080243.1-201ENST00000423293 1060 ntBASIC14.07□□□□□ -0.16
LMO3Q8TAP4 IGF1-205ENST00000424202 612 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LMO3Q8TAP4 AL512599.1-201ENST00000430724 685 ntBASIC14.07□□□□□ -0.16
LMO3Q8TAP4 GCSHP3-201ENST00000431120 391 ntBASIC14.07□□□□□ -0.16
LMO3Q8TAP4 AC098820.2-201ENST00000457694 666 ntTSL 5 BASIC14.07□□□□□ -0.16
LMO3Q8TAP4 AP001360.1-203ENST00000524708 464 ntTSL 3 BASIC14.07□□□□□ -0.16
LMO3Q8TAP4 SPAG5-AS1-204ENST00000556050 871 ntTSL 2 BASIC14.07□□□□□ -0.16
LMO3Q8TAP4 AC099524.1-203ENST00000565272 756 ntTSL 5 BASIC14.07□□□□□ -0.16
LMO3Q8TAP4 AC009163.5-202ENST00000571737 466 ntTSL 3 BASIC14.07□□□□□ -0.16
LMO3Q8TAP4 MIR4472-1-201ENST00000584349 80 ntBASIC14.07□□□□□ -0.16
LMO3Q8TAP4 ETV2-207ENST00000619399 994 ntTSL 5 BASIC14.07□□□□□ -0.16
LMO3Q8TAP4 AC011451.3-201ENST00000634951 582 ntTSL 3 BASIC14.07□□□□□ -0.16
LMO3Q8TAP4 TTC23L-209ENST00000638320 1185 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
LMO3Q8TAP4 NLGN3-206ENST00000612180 3319 ntTSL 5 BASIC14.07□□□□□ -0.16
LMO3Q8TAP4 KIF3A-208ENST00000618515 3333 ntTSL 5 BASIC14.07□□□□□ -0.16
LMO3Q8TAP4 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LMO3Q8TAP4 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
LMO3Q8TAP4 AC126564.1-201ENST00000623628 2013 ntBASIC14.07□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms