Protein–RNA interactions for Protein: P55774

CCL18, C-C motif chemokine 18, humanhuman

Predictions only

Length 89 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL18P55774 ANKZF1-201ENST00000323348 2579 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
CCL18P55774 CCDC138-203ENST00000412964 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
CCL18P55774 LINC00511-213ENST00000581549 2265 ntTSL 2 BASIC9.48□□□□□ -0.89
CCL18P55774 AL358781.1-202ENST00000321081 1360 ntBASIC9.48□□□□□ -0.89
CCL18P55774 HSPA12A-201ENST00000369209 5722 ntAPPRIS P3 TSL 1 (best) BASIC9.48□□□□□ -0.89
CCL18P55774 RC3H2-205ENST00000423239 3623 ntTSL 5 BASIC9.48□□□□□ -0.89
CCL18P55774 CEP131-201ENST00000269392 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
CCL18P55774 INCENP-201ENST00000278849 3698 ntAPPRIS P3 TSL 5 BASIC9.47□□□□□ -0.89
CCL18P55774 Z98885.3-201ENST00000624882 1757 ntBASIC9.47□□□□□ -0.89
CCL18P55774 NOL4L-203ENST00000359676 5991 ntTSL 2 BASIC9.47□□□□□ -0.89
CCL18P55774 HDAC7-202ENST00000354334 4065 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
CCL18P55774 HDAC7-201ENST00000080059 4095 ntAPPRIS P3 TSL 1 (best) BASIC9.47□□□□□ -0.89
CCL18P55774 AADAT-206ENST00000509167 2113 ntAPPRIS ALT1 TSL 1 (best) BASIC9.47□□□□□ -0.89
CCL18P55774 FCHSD1-209ENST00000522783 2477 ntTSL 5 BASIC9.47□□□□□ -0.89
CCL18P55774 TTK-201ENST00000230510 3477 ntAPPRIS ALT2 TSL 2 BASIC9.47□□□□□ -0.89
CCL18P55774 AC009542.1-201ENST00000412549 1810 ntTSL 2 BASIC9.47□□□□□ -0.89
CCL18P55774 RS1-201ENST00000379984 2810 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
CCL18P55774 PTPN6-202ENST00000399448 2159 ntAPPRIS P3 TSL 1 (best) BASIC9.47□□□□□ -0.89
CCL18P55774 C17orf53-203ENST00000585683 2529 ntAPPRIS ALT2 TSL 2 BASIC9.47□□□□□ -0.89
CCL18P55774 SIRPA-203ENST00000400068 4201 ntAPPRIS P3 TSL 1 (best) BASIC9.47□□□□□ -0.89
CCL18P55774 AC015818.9-201ENST00000591705 4582 ntBASIC9.47□□□□□ -0.89
CCL18P55774 GLP2R-204ENST00000574745 1882 ntTSL 2 BASIC9.47□□□□□ -0.89
CCL18P55774 ZHX2-201ENST00000314393 4624 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
CCL18P55774 CCDC13-201ENST00000310232 2943 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
CCL18P55774 VILL-201ENST00000283713 2970 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
CCL18P55774 CCNB2-201ENST00000288207 1556 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
CCL18P55774 OTOF-203ENST00000339598 4756 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
CCL18P55774 CYB561-202ENST00000392975 3007 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
CCL18P55774 AC102953.2-201ENST00000609755 3026 ntBASIC9.47□□□□□ -0.89
CCL18P55774 PRRG4-201ENST00000257836 5530 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
CCL18P55774 BCCIP-202ENST00000299130 2337 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
CCL18P55774 IZUMO1-201ENST00000332955 1621 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
CCL18P55774 LIMS2-206ENST00000409754 1620 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
CCL18P55774 ASPH-208ENST00000517856 6337 ntTSL 2 BASIC9.47□□□□□ -0.89
CCL18P55774 FAM213A-204ENST00000372188 829 ntAPPRIS P1 TSL 2 BASIC9.47□□□□□ -0.89
CCL18P55774 CRIP3-202ENST00000372569 962 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
CCL18P55774 CD300LG-203ENST00000377203 1060 ntAPPRIS ALT2 TSL 2 BASIC9.47□□□□□ -0.89
CCL18P55774 CASP8-206ENST00000392258 1060 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
CCL18P55774 AC092265.1-201ENST00000422638 498 ntTSL 2 BASIC9.47□□□□□ -0.89
CCL18P55774 LINC02557-201ENST00000432249 477 ntTSL 3 BASIC9.47□□□□□ -0.89
CCL18P55774 PSMD4P1-201ENST00000433951 1109 ntBASIC9.47□□□□□ -0.89
CCL18P55774 LINC00028-201ENST00000435497 587 ntTSL 2 BASIC9.47□□□□□ -0.89
CCL18P55774 ZMIZ1-AS1-202ENST00000440151 814 ntTSL 3 BASIC9.47□□□□□ -0.89
CCL18P55774 MIR503HG-202ENST00000440570 760 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
CCL18P55774 AC106869.1-201ENST00000448713 577 ntTSL 4 BASIC9.47□□□□□ -0.89
CCL18P55774 VENTXP4-201ENST00000449029 958 ntBASIC9.47□□□□□ -0.89
CCL18P55774 HOXB-AS3-209ENST00000477144 743 ntTSL 5 BASIC9.47□□□□□ -0.89
CCL18P55774 ZSCAN2-208ENST00000485222 910 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
CCL18P55774 IMMP1L-202ENST00000526776 469 ntTSL 3 BASIC9.47□□□□□ -0.89
CCL18P55774 AL161668.2-201ENST00000531638 492 ntTSL 5 BASIC9.47□□□□□ -0.89
CCL18P55774 CYB561A3-208ENST00000536915 1094 ntAPPRIS P1 TSL 2 BASIC9.47□□□□□ -0.89
CCL18P55774 ZSCAN2-210ENST00000538076 1109 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
CCL18P55774 FOXN3-AS2-201ENST00000554071 1262 ntBASIC9.47□□□□□ -0.89
CCL18P55774 SCAMP5-216ENST00000568081 710 ntTSL 2 BASIC9.47□□□□□ -0.89
CCL18P55774 AC024361.2-201ENST00000574471 898 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
CCL18P55774 HKR1-220ENST00000591259 734 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
CCL18P55774 RPL18A-203ENST00000599870 1084 ntTSL 2 BASIC9.47□□□□□ -0.89
CCL18P55774 AC008972.2-201ENST00000606587 494 ntBASIC9.47□□□□□ -0.89
CCL18P55774 GOLGA2P5-201ENST00000266746 2395 ntBASIC9.47□□□□□ -0.89
CCL18P55774 ETNPPL-202ENST00000411864 2028 ntAPPRIS ALT1 TSL 1 (best) BASIC9.47□□□□□ -0.89
CCL18P55774 CCNI-201ENST00000237654 2772 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
CCL18P55774 SHANK2-218ENST00000601538 9062 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
CCL18P55774 KDM2B-215ENST00000542973 3170 ntTSL 2 BASIC9.47□□□□□ -0.89
CCL18P55774 ZBTB20-206ENST00000464560 2816 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
CCL18P55774 ATXN2L-225ENST00000570200 3635 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
CCL18P55774 MARK2-205ENST00000408948 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
CCL18P55774 FAM212B-AS1-201ENST00000430373 2131 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
CCL18P55774 COL4A6-209ENST00000545689 6380 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
CCL18P55774 SH2D5-201ENST00000375031 3705 ntTSL 2 BASIC9.47□□□□□ -0.89
CCL18P55774 AL645937.6-201ENST00000641122 3727 ntBASIC9.47□□□□□ -0.89
CCL18P55774 LINC02537-201ENST00000635943 1367 ntTSL 4 BASIC9.47□□□□□ -0.89
CCL18P55774 COPS7B-203ENST00000373608 2563 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
CCL18P55774 DYNC1I1-201ENST00000324972 2950 ntAPPRIS P3 TSL 1 (best) BASIC9.47□□□□□ -0.89
CCL18P55774 AC012435.1-201ENST00000563287 3385 ntTSL 2 BASIC9.47□□□□□ -0.89
CCL18P55774 PPT2-EGFL8-202ENST00000422437 4181 ntAPPRIS P5 TSL 5 BASIC9.47□□□□□ -0.89
CCL18P55774 CATSPERE-202ENST00000366533 3019 ntAPPRIS P3 TSL 1 (best) BASIC9.47□□□□□ -0.89
CCL18P55774 LINC00969-231ENST00000597482 1476 ntTSL 5 BASIC9.47□□□□□ -0.89
CCL18P55774 DMTF1-202ENST00000394703 4038 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
CCL18P55774 AC073869.1-201ENST00000415574 2762 ntBASIC9.46□□□□□ -0.89
CCL18P55774 GHET1-201ENST00000627071 1906 ntBASIC9.46□□□□□ -0.89
CCL18P55774 FBN1-201ENST00000316623 11756 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
CCL18P55774 Z97192.2-201ENST00000393264 2379 ntTSL 2 BASIC9.46□□□□□ -0.89
CCL18P55774 ART3-201ENST00000341029 1517 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.89
CCL18P55774 MINDY1-205ENST00000493834 1546 ntTSL 2 BASIC9.46□□□□□ -0.89
CCL18P55774 HTR3A-201ENST00000299961 1994 ntTSL 2 BASIC9.46□□□□□ -0.89
CCL18P55774 DLGAP1-AS1-201ENST00000317114 1966 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
CCL18P55774 RUBCNL-201ENST00000378781 3322 ntAPPRIS ALT2 TSL 2 BASIC9.46□□□□□ -0.89
CCL18P55774 ERVK13-1-207ENST00000569465 3321 ntTSL 2 BASIC9.46□□□□□ -0.89
CCL18P55774 MTHFSD-204ENST00000546093 2451 ntTSL 2 BASIC9.46□□□□□ -0.89
CCL18P55774 GREB1-201ENST00000234142 8444 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
CCL18P55774 ALPP-201ENST00000392027 2971 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
CCL18P55774 SLC39A6-204ENST00000590986 3003 ntAPPRIS P3 TSL 5 BASIC9.46□□□□□ -0.89
CCL18P55774 ANGPTL2-201ENST00000373417 2575 ntTSL 2 BASIC9.46□□□□□ -0.89
CCL18P55774 BAK1-202ENST00000374467 2136 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
CCL18P55774 RERG-204ENST00000536465 2134 ntAPPRIS P1 TSL 3 BASIC9.46□□□□□ -0.89
CCL18P55774 TBC1D3L-201ENST00000612727 2148 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
CCL18P55774 APBA2-212ENST00000561069 3138 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.89
CCL18P55774 TBC1D2-204ENST00000375066 3198 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
CCL18P55774 SPACA9-202ENST00000356311 2243 ntTSL 2 BASIC9.46□□□□□ -0.89
CCL18P55774 ZFC3H1-201ENST00000378743 7285 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms