Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 AC007279.1-201ENST00000448547 837 ntBASIC12.62□□□□□ -0.39
CLK1P49759 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC12.62□□□□□ -0.39
CLK1P49759 TSACC-208ENST00000481479 741 ntTSL 2 BASIC12.62□□□□□ -0.39
CLK1P49759 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC12.62□□□□□ -0.39
CLK1P49759 AC245884.6-201ENST00000515672 1067 ntBASIC12.62□□□□□ -0.39
CLK1P49759 AC145285.5-201ENST00000562217 361 ntBASIC12.62□□□□□ -0.39
CLK1P49759 AC009163.3-201ENST00000563554 852 ntTSL 3 BASIC12.62□□□□□ -0.39
CLK1P49759 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC12.62□□□□□ -0.39
CLK1P49759 SIGLEC18P-201ENST00000602271 909 ntBASIC12.62□□□□□ -0.39
CLK1P49759 AC007326.1-201ENST00000604539 458 ntBASIC12.62□□□□□ -0.39
CLK1P49759 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC12.62□□□□□ -0.39
CLK1P49759 HMGCS1-201ENST00000325110 3506 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CLK1P49759 TNRC6B-203ENST00000402203 3444 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
CLK1P49759 PCDHAC1-201ENST00000253807 5299 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
CLK1P49759 ARMC9-215ENST00000614261 4975 ntTSL 5 BASIC12.62□□□□□ -0.39
CLK1P49759 GOLGA6L4-203ENST00000510439 4563 ntAPPRIS P2 TSL 5 BASIC12.62□□□□□ -0.39
CLK1P49759 NXPE3-205ENST00000491511 8074 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
CLK1P49759 COPS7B-201ENST00000350033 2544 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CLK1P49759 WIPF3-201ENST00000242140 4184 ntAPPRIS P2 TSL 5 BASIC12.62□□□□□ -0.39
CLK1P49759 RBM12B-201ENST00000399300 7269 ntAPPRIS P2 TSL 2 BASIC12.62□□□□□ -0.39
CLK1P49759 KCNC2-201ENST00000298972 3563 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
CLK1P49759 MSH5-204ENST00000375755 3094 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
CLK1P49759 AREL1-201ENST00000356357 5456 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CLK1P49759 ITFG1-204ENST00000544001 1849 ntTSL 2 BASIC12.62□□□□□ -0.39
CLK1P49759 HTR4-203ENST00000377888 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CLK1P49759 RIOK3-201ENST00000339486 4038 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
CLK1P49759 TJAP1-202ENST00000372444 2778 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
CLK1P49759 TJAP1-203ENST00000372445 2751 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CLK1P49759 POLR1B-201ENST00000263331 4558 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
CLK1P49759 ADPRH-201ENST00000357003 3439 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CLK1P49759 LINC00563-201ENST00000566370 1400 ntBASIC12.62□□□□□ -0.39
CLK1P49759 TBC1D3J-201ENST00000620719 1426 ntBASIC12.62□□□□□ -0.39
CLK1P49759 KCTD10-201ENST00000228495 4163 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CLK1P49759 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CLK1P49759 KCNK10-202ENST00000319231 2725 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
CLK1P49759 DAXX-202ENST00000374542 2613 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
CLK1P49759 DIO1-216ENST00000613679 1856 ntAPPRIS ALT1 TSL 5 BASIC12.61□□□□□ -0.39
CLK1P49759 DCAF13-209ENST00000616836 2639 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CLK1P49759 ZIK1-201ENST00000307468 2510 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CLK1P49759 AL354861.3-201ENST00000600140 2412 ntBASIC12.61□□□□□ -0.39
CLK1P49759 PANK2-206ENST00000497424 4815 ntTSL 2 BASIC12.61□□□□□ -0.39
CLK1P49759 MAP2-201ENST00000199940 2241 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CLK1P49759 PI4KB-201ENST00000368872 3331 ntAPPRIS ALT1 TSL 5 BASIC12.61□□□□□ -0.39
CLK1P49759 C12orf66-201ENST00000311915 2698 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CLK1P49759 CLCNKB-202ENST00000375679 2567 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CLK1P49759 CSNK1G1-209ENST00000634811 2592 ntAPPRIS ALT1 TSL 5 BASIC12.61□□□□□ -0.39
CLK1P49759 PRKCG-201ENST00000263431 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CLK1P49759 NPR2-201ENST00000342694 3686 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CLK1P49759 PRTFDC1-201ENST00000320152 1944 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CLK1P49759 RALGDS-203ENST00000372062 3596 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
CLK1P49759 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
CLK1P49759 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
CLK1P49759 TCEA3-201ENST00000374601 1197 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CLK1P49759 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CLK1P49759 AC007274.2-201ENST00000421675 662 ntBASIC12.61□□□□□ -0.39
CLK1P49759 AL807761.2-201ENST00000422849 729 ntBASIC12.61□□□□□ -0.39
CLK1P49759 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC12.61□□□□□ -0.39
CLK1P49759 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC12.61□□□□□ -0.39
CLK1P49759 AC087269.1-202ENST00000519147 400 ntTSL 3 BASIC12.61□□□□□ -0.39
CLK1P49759 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC12.61□□□□□ -0.39
CLK1P49759 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC12.61□□□□□ -0.39
CLK1P49759 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC12.61□□□□□ -0.39
CLK1P49759 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC12.61□□□□□ -0.39
CLK1P49759 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC12.61□□□□□ -0.39
CLK1P49759 RN7SL574P-201ENST00000581512 297 ntBASIC12.61□□□□□ -0.39
CLK1P49759 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CLK1P49759 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC12.61□□□□□ -0.39
CLK1P49759 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC12.61□□□□□ -0.39
CLK1P49759 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
CLK1P49759 ZNF283-209ENST00000618787 5713 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
CLK1P49759 SIGLECL1-201ENST00000316401 1708 ntAPPRIS P3 TSL 2 BASIC12.61□□□□□ -0.39
CLK1P49759 LINC00477-201ENST00000483544 1710 ntTSL 2 BASIC12.61□□□□□ -0.39
CLK1P49759 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CLK1P49759 MTHFR-202ENST00000376583 7044 ntAPPRIS ALT1 TSL 5 BASIC12.61□□□□□ -0.39
CLK1P49759 VPS33B-202ENST00000535906 2420 ntTSL 2 BASIC12.61□□□□□ -0.39
CLK1P49759 CU639417.6-202ENST00000624872 3241 ntTSL 5 BASIC12.61□□□□□ -0.39
CLK1P49759 LIG1-221ENST00000613670 3949 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CLK1P49759 SMG6-201ENST00000263073 5960 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CLK1P49759 LGR5-202ENST00000536515 2664 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CLK1P49759 TTYH3-203ENST00000403167 4263 ntTSL 5 BASIC12.61□□□□□ -0.39
CLK1P49759 POLR1B-216ENST00000537335 4961 ntTSL 2 BASIC12.61□□□□□ -0.39
CLK1P49759 MZF1-AS1-202ENST00000600534 2567 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CLK1P49759 TSPEAR-201ENST00000323084 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CLK1P49759 CHIAP2-201ENST00000369743 2829 ntTSL 5 BASIC12.61□□□□□ -0.39
CLK1P49759 TMEM182-201ENST00000409173 3198 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CLK1P49759 RBM4-201ENST00000310092 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CLK1P49759 ARHGEF9-203ENST00000374872 2364 ntTSL 2 BASIC12.61□□□□□ -0.39
CLK1P49759 FAM105A-201ENST00000274217 3597 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CLK1P49759 SFMBT2-201ENST00000361972 7922 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CLK1P49759 AQP2-201ENST00000199280 4174 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CLK1P49759 ENOSF1-203ENST00000383578 4188 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CLK1P49759 ARHGAP20-202ENST00000524756 6180 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
CLK1P49759 SLC25A31-201ENST00000281154 1841 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CLK1P49759 VIPAS39-208ENST00000556412 1832 ntTSL 2 BASIC12.6□□□□□ -0.39
CLK1P49759 SMG8-202ENST00000543872 3477 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
CLK1P49759 FOXJ3-202ENST00000361776 5106 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
CLK1P49759 KLF8-202ENST00000374928 4821 ntTSL 2 BASIC12.6□□□□□ -0.39
CLK1P49759 PRKAB1-206ENST00000541640 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CLK1P49759 EPS15L1-201ENST00000248070 2924 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CLK1P49759 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC12.6□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 72 ms