Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 RRNAD1-211ENST00000524343 459 ntTSL 5 BASIC19.19■□□□□ 0.66
CDC42BPAQ5VT25 AC105020.5-201ENST00000614810 423 ntBASIC19.19■□□□□ 0.66
CDC42BPAQ5VT25 PSMB3-211ENST00000619426 773 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CDC42BPAQ5VT25 CDC14B-201ENST00000375240 2547 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CDC42BPAQ5VT25 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CDC42BPAQ5VT25 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CDC42BPAQ5VT25 AGAP4-203ENST00000448048 2439 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CDC42BPAQ5VT25 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
CDC42BPAQ5VT25 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
CDC42BPAQ5VT25 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
CDC42BPAQ5VT25 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
CDC42BPAQ5VT25 JPX-207ENST00000602772 1692 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CDC42BPAQ5VT25 LRRC63-202ENST00000446175 2114 ntAPPRIS P2 TSL 5 BASIC19.18■□□□□ 0.66
CDC42BPAQ5VT25 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CDC42BPAQ5VT25 MTMR11-201ENST00000369140 2324 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
CDC42BPAQ5VT25 WSB1-202ENST00000348811 1611 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CDC42BPAQ5VT25 PIM2-201ENST00000376509 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CDC42BPAQ5VT25 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
CDC42BPAQ5VT25 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
CDC42BPAQ5VT25 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CDC42BPAQ5VT25 CHTF18-201ENST00000262315 3090 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CDC42BPAQ5VT25 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CDC42BPAQ5VT25 KCNH6-204ENST00000581784 3017 ntTSL 2 BASIC19.18■□□□□ 0.66
CDC42BPAQ5VT25 CYTH4-202ENST00000402997 633 ntTSL 4 BASIC19.18■□□□□ 0.66
CDC42BPAQ5VT25 AC006022.1-201ENST00000425261 388 ntBASIC19.18■□□□□ 0.66
CDC42BPAQ5VT25 MAP1LC3BP1-202ENST00000438342 516 ntTSL 3 BASIC19.18■□□□□ 0.66
CDC42BPAQ5VT25 AC068298.1-201ENST00000465165 161 ntBASIC19.18■□□□□ 0.66
CDC42BPAQ5VT25 AC005996.2-201ENST00000465549 564 ntTSL 4 BASIC19.18■□□□□ 0.66
CDC42BPAQ5VT25 AC104819.2-201ENST00000507181 163 ntBASIC19.18■□□□□ 0.66
CDC42BPAQ5VT25 MORF4L1-208ENST00000558746 874 ntTSL 3 BASIC19.18■□□□□ 0.66
CDC42BPAQ5VT25 AC009065.7-201ENST00000561544 580 ntTSL 3 BASIC19.18■□□□□ 0.66
CDC42BPAQ5VT25 SMIM6-202ENST00000579469 957 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CDC42BPAQ5VT25 CTBP2P7-201ENST00000593270 1244 ntBASIC19.18■□□□□ 0.66
CDC42BPAQ5VT25 AL136115.2-201ENST00000602889 587 ntTSL 5 BASIC19.18■□□□□ 0.66
CDC42BPAQ5VT25 MYT1-205ENST00000622439 2140 ntTSL 5 BASIC19.18■□□□□ 0.66
CDC42BPAQ5VT25 OSBPL9-201ENST00000361556 2721 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CDC42BPAQ5VT25 CCNG1-201ENST00000340828 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CDC42BPAQ5VT25 METTL3-201ENST00000298717 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CDC42BPAQ5VT25 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC19.18■□□□□ 0.66
CDC42BPAQ5VT25 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CDC42BPAQ5VT25 SULT2A1-201ENST00000222002 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CDC42BPAQ5VT25 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CDC42BPAQ5VT25 SLC6A9-205ENST00000372310 3130 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
CDC42BPAQ5VT25 HLA-DQA2-210ENST00000374940 1524 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
CDC42BPAQ5VT25 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CDC42BPAQ5VT25 IGF2BP1-202ENST00000431824 1317 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CDC42BPAQ5VT25 GRB10-202ENST00000357271 2050 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CDC42BPAQ5VT25 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
CDC42BPAQ5VT25 AC119674.2-203ENST00000642129 1675 ntAPPRIS P5 BASIC19.17■□□□□ 0.66
CDC42BPAQ5VT25 SCARB2-202ENST00000452464 1495 ntTSL 2 BASIC19.17■□□□□ 0.66
CDC42BPAQ5VT25 TMEM25-204ENST00000359862 2395 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDC42BPAQ5VT25 AC010970.1-201ENST00000445125 1848 ntBASIC19.17■□□□□ 0.66
CDC42BPAQ5VT25 SPANXD-201ENST00000370515 682 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDC42BPAQ5VT25 LST1-205ENST00000376089 680 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CDC42BPAQ5VT25 LST1-206ENST00000376090 689 ntTSL 2 BASIC19.17■□□□□ 0.66
CDC42BPAQ5VT25 LST1-208ENST00000376093 648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDC42BPAQ5VT25 LST1-210ENST00000376099 610 ntTSL 2 BASIC19.17■□□□□ 0.66
CDC42BPAQ5VT25 LST1-214ENST00000418507 726 ntTSL 2 BASIC19.17■□□□□ 0.66
CDC42BPAQ5VT25 CSMD2-AS1-205ENST00000434181 655 ntTSL 3 BASIC19.17■□□□□ 0.66
CDC42BPAQ5VT25 LST1-217ENST00000438075 764 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDC42BPAQ5VT25 MYLK-AS1-203ENST00000485162 587 ntTSL 4 BASIC19.17■□□□□ 0.66
CDC42BPAQ5VT25 AC245164.1-201ENST00000517731 412 ntTSL 3 BASIC19.17■□□□□ 0.66
CDC42BPAQ5VT25 AP000812.3-201ENST00000544535 609 ntBASIC19.17■□□□□ 0.66
CDC42BPAQ5VT25 AC137932.2-201ENST00000562995 1205 ntTSL 2 BASIC19.17■□□□□ 0.66
CDC42BPAQ5VT25 AFMID-205ENST00000586731 550 ntTSL 3 BASIC19.17■□□□□ 0.66
CDC42BPAQ5VT25 AFMID-210ENST00000589256 578 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CDC42BPAQ5VT25 AC108002.3-201ENST00000612629 503 ntTSL 2 BASIC19.17■□□□□ 0.66
CDC42BPAQ5VT25 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
CDC42BPAQ5VT25 HTR3E-206ENST00000440596 1449 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CDC42BPAQ5VT25 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
CDC42BPAQ5VT25 NTM-202ENST00000374786 3190 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDC42BPAQ5VT25 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDC42BPAQ5VT25 GUCY1B3-202ENST00000502959 2255 ntTSL 2 BASIC19.17■□□□□ 0.66
CDC42BPAQ5VT25 RNF34-203ENST00000392465 2051 ntAPPRIS P3 TSL 5 BASIC19.17■□□□□ 0.66
CDC42BPAQ5VT25 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDC42BPAQ5VT25 ZNF583-201ENST00000291598 2538 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
CDC42BPAQ5VT25 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDC42BPAQ5VT25 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC19.17■□□□□ 0.66
CDC42BPAQ5VT25 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDC42BPAQ5VT25 FRG1-201ENST00000226798 1074 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDC42BPAQ5VT25 RPL30-201ENST00000287038 543 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDC42BPAQ5VT25 TSPAN16-201ENST00000316737 1040 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDC42BPAQ5VT25 ATXN3-201ENST00000340660 1205 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CDC42BPAQ5VT25 NME1-NME2-201ENST00000376392 894 ntTSL 5 BASIC19.17■□□□□ 0.66
CDC42BPAQ5VT25 DNAL4-202ENST00000406199 631 ntTSL 2 BASIC19.17■□□□□ 0.66
CDC42BPAQ5VT25 FAM153C-208ENST00000511189 926 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
CDC42BPAQ5VT25 AC022217.2-201ENST00000518941 472 ntTSL 2 BASIC19.17■□□□□ 0.66
CDC42BPAQ5VT25 GACAT2-201ENST00000579368 818 ntTSL 2 BASIC19.17■□□□□ 0.66
CDC42BPAQ5VT25 MIR4761-201ENST00000585066 82 ntBASIC19.17■□□□□ 0.66
CDC42BPAQ5VT25 TRMT112P6-201ENST00000599234 372 ntBASIC19.17■□□□□ 0.66
CDC42BPAQ5VT25 RN7SK-201ENST00000636484 328 ntBASIC19.17■□□□□ 0.66
CDC42BPAQ5VT25 AC105206.1-202ENST00000314927 2368 ntBASIC19.17■□□□□ 0.66
CDC42BPAQ5VT25 CT55-202ENST00000344129 1728 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDC42BPAQ5VT25 SRSF1-205ENST00000582730 3117 ntTSL 2 BASIC19.16■□□□□ 0.66
CDC42BPAQ5VT25 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDC42BPAQ5VT25 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDC42BPAQ5VT25 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDC42BPAQ5VT25 AGAP5-202ENST00000443782 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDC42BPAQ5VT25 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC19.16■□□□□ 0.66
CDC42BPAQ5VT25 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 62.9 ms